Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1584 ATGGTGAGGAAATGGAGGTGGGGAGAGCCGGTGCTGCTAATCAGTATCTGCATTTTGGGATGGAGAGCCAGTTTTATCAATGGAGCCACGGATCCAGGAGATGTGTCTGCTCTAAATGCCATGTATAGTAGTTTAAACTCGCCTCCAATCCTAACACAATGGAGTTCAACTGGTGGAGATCCATGTGGGCAAATTTGGAAAGGCATTACTTGCTCAGGCCCACGGGTCACAGAAATTTCATTGTCTGGTTTAGGACTTGCTGGATCTCTGGGATACCAGCTCTCAAGTTTGACATCTCTAATTAATCTAGATGTGAGTTTCAACAATCTTGGACCTGACATACCTTATCAACTCCCTCAAAACTTGCAAAAACTAAACTTTGGATGGAATAACTTCAGTGGAAGCATCCCCTATTCTATTTCTCAAATGAGTTTGCTTATTTCCTTGAACATCAGCCATAATCAGCTTCGGAATCAAGTGAATGATATGTTCTGGAATCTTTCTTCCCTGTCCATGTTGGACGTCTCTTTCAATTTTCTGTCAAGTGCCCTCCCCCAGAGTTTTAGCAACCTTACCAGTATGAACTCAATGTTTCTGCAAAACAACCAACTCAGTGGCACTATTGATGTTCTTGCAAATCTTCCACTACAAATCTTGAATGTCGAGAACAACCATTTTACTGGATGGGTTCCTGAACGATTGAAGACCATAAATATTCAGGAGGGTGGCAATTCTTGGAGCTTTGGGCTTGCACCTCCACCTCCTCCAGCCAACCAAAATTACAGATTTCACAAGCCTGGGAACAATTACAGCCCACTGAGTAGTAATGCTGCTGGTGGAGATAGCAGTAGATCAGGAATCAGTGGTGGCGCCATTGCTGGAATTCTTATATCTGTGCTAGTAGTGGGAGCAGTACTAGCATATTTGTTTGTAAAGCGAAAAACCAAGAAGTCATCCACAGACATAGAAAAGCAAAAGCTTGGGAACCTGCCTAGCGTATTGCCTGCTGCGAATGAAGTGCAAGATTCATTGGCAGAGATGAAGCTTATTCATACTTCATCATCATTTGATGCAAAAGCATTGGATTCTCCTGCTTCAATCAATCTTAAACCACCACCTGTTGATCGTCATAAATCATTTGATGACAATGATACATCAAAGATACCTGTTGTGAAGAAGACCAACGTGGCCCCTCCGATAAGTGTGAAGTCGTATTCAATAGCAGATCTGCAAATGGCTACAGGCAGTTTCAACGTAGAAAACCTTCTTGGTGAGGGATCACTTGGACGCGTTTATCGGGCTCAGTTCGATGATGGGAAGGTCCTTGCTGTGAAGAAAATAGATTCAGCTGCCTTCCCTAGAGAATTGTTGGAAGATTTTACAGAGATCGTTGCTAATGTATCTCAGTTGCATCATCCTAATGTAACCGAGCTAATGGGTTATTGCTCAGAGCATGGTCTACATTTGCTACTACATGAGTTCCATAAGAATGGTTCACTACATGATTTCTTGCATATATCAGATGAATATAGCAAGCCACTGACTTGGAACTCACGTGTCAAGATCGCTTTGGGGACGGCCCGTGCATTGGAGTACCTACATGAAATCTGTGCACCATCAGTTCTTCACAGAAATATTAAGTCAGCCAATATCTTACTGGATGCTGAACTTAATCCTCATCTCTCCGATTGTGGCCTTGCTAGCTTTATAACCAATCTAGAACAGGCATTAGATCAGCAGGCAGGATCGGGATACAGTGCCCCAGAGGTTACCATGTCTGGTCAATATACATTAAAAAGTGATGTATACAGCTTTGGAGTGGTGATGTTAGAACTTCTAAGCGGGCGTCAGCCGTTTGATAGTTCAAGGCCACGAGCTGAGCAATCCTTGGTTCGATGGGCTACGCCTCAGCTCCATGACATTGATGCCTTGACGAAAATGGTTGATCCCGCACTTAAAGGGCTCTACCCAGTCAAGTCCCTCTCGAGATTTGCAGACGTTGTGGCTCTCTGCGTCCAGCCCGAGCCCGAGTTCAGACCACCCATGTCAGAGGTGGTGGAAGCTTTGGTTCGACTTGTGCAGCGATCCAACATGAGCAGAAGAACATTTGGAAGTGATCACGGATCATCTTTTAGAACTGATGATCCTGATGCACATGAAACATCTTAA 2169 44.08 MVRKWRWGEPVLLISICILGWRASFINGATDPGDVSALNAMYSSLNSPPILTQWSSTGGDPCGQIWKGITCSGPRVTEISLSGLGLAGSLGYQLSSLTSLINLDVSFNNLGPDIPYQLPQNLQKLNFGWNNFSGSIPYSISQMSLLISLNISHNQLRNQVNDMFWNLSSLSMLDVSFNFLSSALPQSFSNLTSMNSMFLQNNQLSGTIDVLANLPLQILNVENNHFTGWVPERLKTINIQEGGNSWSFGLAPPPPPANQNYRFHKPGNNYSPLSSNAAGGDSSRSGISGGAIAGILISVLVVGAVLAYLFVKRKTKKSSTDIEKQKLGNLPSVLPAANEVQDSLAEMKLIHTSSSFDAKALDSPASINLKPPPVDRHKSFDDNDTSKIPVVKKTNVAPPISVKSYSIADLQMATGSFNVENLLGEGSLGRVYRAQFDDGKVLAVKKIDSAAFPRELLEDFTEIVANVSQLHHPNVTELMGYCSEHGLHLLLHEFHKNGSLHDFLHISDEYSKPLTWNSRVKIALGTARALEYLHEICAPSVLHRNIKSANILLDAELNPHLSDCGLASFITNLEQALDQQAGSGYSAPEVTMSGQYTLKSDVYSFGVVMLELLSGRQPFDSSRPRAEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVEALVRLVQRSNMSRRTFGSDHGSSFRTDDPDAHETS 722
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21031314 21040708 - Hsped.02g15840.1 Hepe02g1584 563085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1584 722 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 31 257 - -
Hepe02g1584 722 Gene3D Ribonuclease Inhibitor 31 256 IPR032675 -
Hepe02g1584 722 SUPERFAMILY Protein kinase-like (PK-like) 398 689 IPR011009 -
Hepe02g1584 722 Gene3D Transferase(Phosphotransferase) domain 1 496 712 - -
Hepe02g1584 722 PANTHER LEUCINE RICH REPEAT KINASE 2 292 691 IPR051420 -
Hepe02g1584 722 MobiDBLite consensus disorder prediction 707 722 - -
Hepe02g1584 722 Gene3D Phosphorylase Kinase; domain 1 379 494 - -
Hepe02g1584 722 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 495 703 - -
Hepe02g1584 722 CDD STKc_IRAK 423 692 - -
Hepe02g1584 722 Pfam Leucine Rich Repeat 121 143 IPR001611 GO:0005515(InterPro)
Hepe02g1584 722 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 381 494 - -
Hepe02g1584 722 SMART LRR_typ_2 167 190 IPR003591 -
Hepe02g1584 722 SMART LRR_typ_2 97 121 IPR003591 -
Hepe02g1584 722 SMART LRR_typ_2 143 166 IPR003591 -
Hepe02g1584 722 SUPERFAMILY L domain-like 30 234 - -
Hepe02g1584 722 ProSiteProfiles Protein kinase domain profile. 417 692 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1584 722 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Hepe02g1584 722 Pfam Protein tyrosine and serine/threonine kinase 419 689 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1584 722 MobiDBLite consensus disorder prediction 701 722 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0159 Hepe-Chr2:1705438 Hepe02g1584 Hepe-Chr2:21031314 3.02e-129 dispersed
Hepe02g1584 Hepe-Chr2:21031314 Hepe07g1580 Hepe-Chr7:54699284 6.96e-183 dispersed
Hepe02g1584 Hepe-Chr2:21031314 Hepe03g1378 Hepe-Chr3:70423070 9.06e-269 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72567 PF07714 PK_Tyr_Ser-Thr 7.40E-41 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1584 - - - 0.0