Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1594 ATGCAGCAGCTGCTTGTTTTCCGCCATTTCTTGCTACTGGTAAGCTTCTCTTTCCTTATCTATCTCGTTTCTGGTTTAACCTCTGATGGGTTAGCTTTATTATCACTCCAAACGCACTGGACTACTCAAACCCCTTTTCTCCCTGTTTGGAATGCTTCTGATTCCACCCCATGTTCTTGGGCTGGGATTCAATGTGGTAAAAATCTTCGTGTCATCACCTTCAATCTCTCTTTTTATGGAATTTCCGGTCAGCTTGGACCCGAAATTGCTCGTTTGACCCAGTTGCGTACCCTCGATTTGACCACCAATGATTTATCTGGTGCAATTCCTTATGGGATTGGGAACTGTACCCATTTAGAGTACTTGGATCTCTCTCTCAACCAATTTGCTGGAGAAATTCCTCTGTCGTTAACACACCTTAGGAACTTGACGTTTTTGAATTTCCATTCCAATGTTCTAACGGGCGCAATACCCAACTCCTTATTTGAAATTCTGAATTTGCAGTATGTGTATCTTAGTGAAAACAATCTCAACGGTTCTATTCCTTCAAATGTGGGGAATTTGAGGCAGCTGTTTCATTTGTATCTGTATGGAAATCAGTTGTCTGGAACTATACCTTCTTCCATTGGGAATTGTAGCCAATTGGTGGATCTTTATTTGGATCAGAACCAATTGGTGGGAGTGTTGCCCAATAGTCTTAACAATCTTCATAATCTTGTTAATCTGGGTGTAAGCCACAACAAACTTGAGGGTCCAATTCCATTGGGTTCAGGCACATGCCAGAGTCTAGAATATATAGATTTGTCATTCAATGCTTATACAGGAGGTATACCTGCCGGGCTGGGCAACTGTAGTCGCCTAACAACCTTACTCATTATAAATTCCAATCTAACAGGTCATATTCCTTCCTCTTTTGGCCGGCTAAATAAGCTTTCGCTTCTTGATCTATCTAGAAATCAGCTGTCTGGGAATATACCCCGCGAACTCCGGACCTGCAAGTCCTTGAAAGAACTGAATTTGTATGTCAACCAACTTGAGGGACATATCCCCAGTGAATTGGGTTTGCTAAGTAGATTAGAGACCCTTCAATTGTTTTCGAACCAATTGACTGGCGAGATTCCAATTAGCATCTGGAAGATTGCAAGTCTTCGACATATTCTTGTGTACAACAACAACCTTTCTGGGGAACTGCCCTTGATAATAACTGAGCTCAAGCACCTCGAAAACATTTCTGTGTTCAACAACCATTTTTCTGGAGTCATACCTCAAAGTTTGGGACTCAACAGTAGCTTAGTGCAAGTGGAGTTCACTAATAACCAGTTCACTGGTCAAATTCCACCTAATCTATGCTCTGGAAAAACATTAAGGGTGTTAAATTTAGGGTTGAATCAATTTCGAGGTAGCGTACCTTCAGATATTGGAACTTGTTTGACTCTTCAGAGGTTGATTTTCAGAAGGAATTATCTAACAGGGGTTCTGCCTGAGTTTATGAGAAATCATGGCCTTGGGTTCATGGATGCCAGTGAAAATAACCTGAATGGAACAATTCCCTCAAGTTTGGGAAATTGCATGAATCTCACCTCAATTAATTTGTCAAACAACAAGCTTACAGGTCCTATACCTAATGAGTTGGGAAATCTTGTGAATCTTCAAAGTTTGAATTTGTCTCACAATTTGTTGGAGGGACCTTTGCCATCTTCCCTGTCACATTGTACCAAACTGGATGAATTTGACGTAGGATTCAATTTATTGAATGGTTCTGTACCTCATAGTTTGGCCAGCTGGAAAGTTATATCCACGTTGATATTAAAAGAGAATCGATTTACTGGAGGCATCCCGAATGTATTATCAGAACTTGAAAGCCTTGCACTGCTCGATCTTGGTGGTAATTTGTTTGGAGGTGAAATCCCTTCATCTATTGGAGCTTTGAAGAATCTTTTTTATTCCTTGAATCTCAGCAACAATGGGTTAACAGGCCAACTACCTTCTGAGCTATTGAGTCTGAACAAGCTAGAGGAGTTAGATATATCTCACAATAATTTGACTGGAAGTTTAAGCATTCTCGGCGACCTAAGTTCATCATTAGTTGAGCTTAACATTTCAGATAATTTCTTCACAGGTCCTGTGCCACAGACATTAATGAAGTTACTGAATTCTGATCCCTCATCGTTCTTCAATAACCCTGGGATTTGCATCAGCTGTGATGAACTAGATGGCTTAAGTTGCAATAGAAATAGCAGTATCAAACCTTGTGCTACTCATTCAAGCTCGCGTGGTAGTTCTCGTCTTAGCAATGTACAAATTGCAATGATAGCTCTAGGATCTTCACTGTTTATTATTCTTTTGCTTCTTGGATTGGTTTATAAGTTTGTTTATAGCAGAAGAAACAAGCAAAACATTGAGACTGCTACTCAAGTAGGAACAACTTCCTTGCTCGACAAGGTAATGGAGGCCACTGATAATCTAGATGAGCGTTTCGTCATTGGGAGAGGCGCACATGGAGTTGTTTATAAGGCTTCCCTGGATTCAAATAGAACTTTTGCAGTAAAGAAGCTTACATTTGTAGAACGTAAAGGTGGAAGCCAGAATATGCTTAAAGAAATTCGAATTGTCGGCAATATCAGGCACCGAAACTTGATCACTTTGGAAGACTTTTGGTTGGGAAAAGACCACGGTCTATTGCTTTACAGATATCAGCCGAATGGGAGCCTTTACGATGTGTTGCATGAGATGAATCCAGCTCTAACATGGAAAGACCGCTATAATATAGCCACTGGTATTGCTCATGGATTGGCGTATCTCCATTACGATTGCGATCCCCCTATAATACACCGAGACATCAAACCACATAATATACTTCTAGATTCGGAGATGGAACCTCGTATCGCCGATTTTGGTCTTGCGAAGCTTCTGGATCAAACTTCTGAATCAGCAACTTCTTCGTCTTCTTTTGCGGGTACAATTGGCTACATTGCACCAGAGAGTGCATTTGCAGCAGCAAAGAGCAAAGCTTCAGATGTTTACAGTTATGGGGTGGTTTTACTCGAGCTGATAACAGGAAAGAAACCATCGGATTCATCATTTATTGAGGTCGGGAATATCATGGCTTGGGTTCGATCGGTTTGGAGCGAGATGGAAGATATAGATAGAATTGTTGATCCGAGGCTTGTGGAAGAACTTGTATATACTGATCGTAGGGAGCAGATTAAGCAGGTGGTTCTGATAGCTTTGAGATGCACAGAAAAGGAGCCTAACAAGAGACCTTCAATGCGAGATGTTGTCAACCACATGATTGATTCAAAGACTAGTCATTACATCAAACATGACTAA 3330 40.87 MQQLLVFRHFLLLVSFSFLIYLVSGLTSDGLALLSLQTHWTTQTPFLPVWNASDSTPCSWAGIQCGKNLRVITFNLSFYGISGQLGPEIARLTQLRTLDLTTNDLSGAIPYGIGNCTHLEYLDLSLNQFAGEIPLSLTHLRNLTFLNFHSNVLTGAIPNSLFEILNLQYVYLSENNLNGSIPSNVGNLRQLFHLYLYGNQLSGTIPSSIGNCSQLVDLYLDQNQLVGVLPNSLNNLHNLVNLGVSHNKLEGPIPLGSGTCQSLEYIDLSFNAYTGGIPAGLGNCSRLTTLLIINSNLTGHIPSSFGRLNKLSLLDLSRNQLSGNIPRELRTCKSLKELNLYVNQLEGHIPSELGLLSRLETLQLFSNQLTGEIPISIWKIASLRHILVYNNNLSGELPLIITELKHLENISVFNNHFSGVIPQSLGLNSSLVQVEFTNNQFTGQIPPNLCSGKTLRVLNLGLNQFRGSVPSDIGTCLTLQRLIFRRNYLTGVLPEFMRNHGLGFMDASENNLNGTIPSSLGNCMNLTSINLSNNKLTGPIPNELGNLVNLQSLNLSHNLLEGPLPSSLSHCTKLDEFDVGFNLLNGSVPHSLASWKVISTLILKENRFTGGIPNVLSELESLALLDLGGNLFGGEIPSSIGALKNLFYSLNLSNNGLTGQLPSELLSLNKLEELDISHNNLTGSLSILGDLSSSLVELNISDNFFTGPVPQTLMKLLNSDPSSFFNNPGICISCDELDGLSCNRNSSIKPCATHSSSRGSSRLSNVQIAMIALGSSLFIILLLLGLVYKFVYSRRNKQNIETATQVGTTSLLDKVMEATDNLDERFVIGRGAHGVVYKASLDSNRTFAVKKLTFVERKGGSQNMLKEIRIVGNIRHRNLITLEDFWLGKDHGLLLYRYQPNGSLYDVLHEMNPALTWKDRYNIATGIAHGLAYLHYDCDPPIIHRDIKPHNILLDSEMEPRIADFGLAKLLDQTSESATSSSSFAGTIGYIAPESAFAAAKSKASDVYSYGVVLLELITGKKPSDSSFIEVGNIMAWVRSVWSEMEDIDRIVDPRLVEELVYTDRREQIKQVVLIALRCTEKEPNKRPSMRDVVNHMIDSKTSHYIKHD 1109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21182977 21187081 + Hsped.02g15940.1 Hepe02g1594 563095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1594 1109 Pfam Protein kinase domain 827 1096 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1594 1109 ProSiteProfiles Protein kinase domain profile. 822 1099 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1594 1109 Gene3D Phosphorylase Kinase; domain 1 787 898 - -
Hepe02g1594 1109 ProSitePatterns Protein kinases ATP-binding region signature. 828 851 IPR017441 GO:0005524(InterPro)
Hepe02g1594 1109 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 788 898 - -
Hepe02g1594 1109 SUPERFAMILY RNI-like 75 441 - -
Hepe02g1594 1109 SMART LRR_typ_2 213 235 IPR003591 -
Hepe02g1594 1109 SMART LRR_typ_2 547 571 IPR003591 -
Hepe02g1594 1109 SMART LRR_typ_2 140 164 IPR003591 -
Hepe02g1594 1109 SMART LRR_typ_2 188 212 IPR003591 -
Hepe02g1594 1109 SMART LRR_typ_2 308 332 IPR003591 -
Hepe02g1594 1109 SMART LRR_typ_2 619 643 IPR003591 -
Hepe02g1594 1109 SMART LRR_typ_2 668 691 IPR003591 -
Hepe02g1594 1109 SMART LRR_typ_2 356 380 IPR003591 -
Hepe02g1594 1109 SMART LRR_typ_2 92 116 IPR003591 -
Hepe02g1594 1109 SMART LRR_typ_2 236 260 IPR003591 -
Hepe02g1594 1109 ProSitePatterns Serine/Threonine protein kinases active-site signature. 942 954 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1594 1109 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 183 277 - -
Hepe02g1594 1109 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 502 1097 - -
Hepe02g1594 1109 PRINTS Leucine-rich repeat signature 668 681 - -
Hepe02g1594 1109 PRINTS Leucine-rich repeat signature 311 324 - -
Hepe02g1594 1109 SMART LRR_sd22_2 92 124 - -
Hepe02g1594 1109 SMART LRR_sd22_2 236 268 - -
Hepe02g1594 1109 SMART LRR_sd22_2 547 579 - -
Hepe02g1594 1109 SMART LRR_sd22_2 668 693 - -
Hepe02g1594 1109 SMART LRR_sd22_2 188 214 - -
Hepe02g1594 1109 Pfam Leucine Rich Repeat 694 716 IPR001611 GO:0005515(InterPro)
Hepe02g1594 1109 Pfam Leucine Rich Repeat 334 354 IPR001611 GO:0005515(InterPro)
Hepe02g1594 1109 Pfam Leucine Rich Repeat 649 668 IPR001611 GO:0005515(InterPro)
Hepe02g1594 1109 Pfam Leucine Rich Repeat 525 547 IPR001611 GO:0005515(InterPro)
Hepe02g1594 1109 Pfam Leucine Rich Repeat 166 188 IPR001611 GO:0005515(InterPro)
Hepe02g1594 1109 Pfam Leucine Rich Repeat 94 116 IPR001611 GO:0005515(InterPro)
Hepe02g1594 1109 Pfam Leucine Rich Repeat 311 332 IPR001611 GO:0005515(InterPro)
Hepe02g1594 1109 Pfam Leucine Rich Repeat 358 379 IPR001611 GO:0005515(InterPro)
Hepe02g1594 1109 Pfam Leucine Rich Repeat 670 685 IPR001611 GO:0005515(InterPro)
Hepe02g1594 1109 Pfam Leucine Rich Repeat 191 212 IPR001611 GO:0005515(InterPro)
Hepe02g1594 1109 Pfam Leucine Rich Repeat 262 284 IPR001611 GO:0005515(InterPro)
Hepe02g1594 1109 Pfam Leucine Rich Repeat 549 571 IPR001611 GO:0005515(InterPro)
Hepe02g1594 1109 Pfam Leucine Rich Repeat 118 140 IPR001611 GO:0005515(InterPro)
Hepe02g1594 1109 SUPERFAMILY Protein kinase-like (PK-like) 802 1097 IPR011009 -
Hepe02g1594 1109 FunFam Serine/threonine-protein kinase-like protein CCR4 899 1109 - -
Hepe02g1594 1109 Gene3D Ribonuclease Inhibitor 354 431 IPR032675 -
Hepe02g1594 1109 SUPERFAMILY RNI-like 410 719 - -
Hepe02g1594 1109 Gene3D Ribonuclease Inhibitor 27 184 IPR032675 -
Hepe02g1594 1109 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 25 182 - -
Hepe02g1594 1109 SMART serkin_6 822 1106 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1594 1109 Gene3D Transferase(Phosphotransferase) domain 1 900 1108 - -
Hepe02g1594 1109 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Hepe02g1594 1109 Gene3D Ribonuclease Inhibitor 432 737 IPR032675 -
Hepe02g1594 1109 Gene3D Ribonuclease Inhibitor 189 353 IPR032675 -
Hepe02g1594 1109 FunFam Predicted protein 300 399 - -
Hepe02g1594 1109 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 453 739 - -
Hepe02g1594 1109 ProSiteProfiles Leucine-rich repeat profile. 670 692 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1594 Hepe-Chr2:21182977 Hepe06g1892 Hepe-Chr6:70119714 5.79e-59 dispersed
Hepe02g1594 Hepe-Chr2:21182977 Hepe02g1596 Hepe-Chr2:21194246 1.82e-53 proximal
Hepe02g1594 Hepe-Chr2:21182977 Hepe02g1595 Hepe-Chr2:21191210 2.78e-151 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72569 PF00069 Pkinase 7.40E-50 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1594 K28089 - csv:101204561 1696.79