Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1595 ATGTATGACACTGTGGGTTTGCTTGTTTCCCGCCGTTTCTTGCTACTGGTATGCTTCTCTTTCCATATTTATGTTGTTTCTGGTTTAACCTTAGATGGGTTGTCTTTATTGTCACTCCAAACCCGCTGGACTACTCAAACTCCTTTTGTTCCTGTTTGGAATGCCTCTGATTCCACTCCCTGTTCTTGGGTTGGGATTCAATGTGATCAAAACCTTCGTGTCATCACCTTGAATCTCTCTGGTTATGGGGTTTCCGGTCAGCTTGGACCCGAAATTGCGCGTTTGACCCAGTTGCGTACCGTTGATTTGACCACCAACGATTTGTCTGGTGCAATTCCTTATGGGATAGGTAACTGTACCCATTTAGAGTACTTGGATCTCTCCCTCAACCAATTTGGTGGAGAAATTCCTCTTTCGTTAACACACCTTGGGAACTTGACGTTTTTGAATTTCCATACCAATGTGCTAACAGGTGCAATACCCGACTCCTTATTTCAAATTCTGAGTTTGCAGTATGTGTATCTTAGCGAAAACAATCTCAACGGTTCTATTCCTTCAAATGTGGGGAATTTGAGGCAGCTGTTGCATTTGTATCTGTATGGAAATCAATTGTCTGGAACTATACCTTCTTCCATAGGGAATTGTAGCCAATTGGTGGAGCTAATTTTGGATCATAACCAATTGGTGGGAGTGTTGCCTAATAGTCTTAACAATCTTCATAATCTTGTGGCTTTGGGTGTAAGCCAAAACAAACTTGAGGGTCCAATTCCTTTGGGTTCAGGGGGCTGCCAGAGTTTAGAATATATAGATTTGTCATTCAATGCTTATACAGGAGGTATACCTGCCGGGCTGGGCAACTGTAGTCGCCTAACAACCTTAGTCATTATAAACTCCAGTCTAACAGGTCATATTCCGTCCTCCTTTGGCCGGCTAAATAAGCTTTCGCTTCTTGATCTATCTAGAAATCAACTGTCTGGGAATATACCCCGCGAACTCGGTGCCTGCAAATCCTTGAAACAACTGAATTTGTATGTCAACCAACTGGAGGGACATATCCCTAGTGAACTGGGTTTGCTAAGTGGATTAGAGGTCCTTCAATTGTTTTCGAACCGATTGACTGGTGAGATTCCAATTAGCATCTGGAAGATTGCAAGTCTCCAGCATATTATTGTGTACAACAACAACCTTTCTGGGGAACTGCCCTTGGTAATAACTGCGCTCGAGCACCTCAAAAACATTTCTGTGTTCAACAACCATTTTTCTGGAGTCATACCTCAAAGTTTGGGACTCAACAGTAGCTTAGTGCAAGTGGAGTTCACTAATAACCAGTTCTCTGGTCAAATTCCACCTAATCTATGCTCTGGAAAAACATTAAGGGTGTTAAATTTAGGTTTGAATCAATTTCAAGGCAGCGTACCTTCAGATATTGGTACTTGTTTGACTCTTCAGAGGTTGATTTTGAGAAGGAATAATCTAACAGGGGTTCTCCCAGAATTTATGAGAAATCATGGCCTTAGGTTCATGGATGCGAGTGAAAATAACCTGAATGGAACAATTCCCTCAAGTTTGGGAAATTGCATCAATATCACCTCAATTAATTTGTCAAACAACAAACTTACAGGTCTTATCCCGAATGAGTTGGGAAATCTTGTGAATCTTCGAAGTTTGAGTTTGTCTCACAACTTTTTGGAAGGACCTTTGCCATCTTCCCTGTCACATTGTACCAAACTCGATGAGTTTGACGTTGGATTCAATTTATTGAATGGCTCTGTACCTCATAGTTTGGCCAGCTGGAAAGTTATATCCACGTTGATATTAAAAGAGAATCGACTTACTGGAGGCATCCCAAATGTATTAACAGAACTTGAAAGCCTTTTACTGCTAGATGTTGGTGGCAATTTGTTTGGAGGTGAAATCCCTTCATCTATTGGAGCTTTGAAGAATCTGTTTTATTCCTTGAATCTCAGTAACAATGGGTTAACTGGCCAAATACCTTCCGAGTTAAAGAGTCTGGCAATGCTAGAGAAGTTAGATATATCTCACAACAATTTGACTGGAAGCTTAAGAATCCTTGGCGAACTCAGTACATCGGTATTTGAGCTTAACATTTCAGATAATTTATTCACGGGTCCTGTGCCACAGAAGTTAATGAAGTTACTGGATTCTCATCCCTCATCGTTCTTAGGTAACCCTGAGCTGTGCATCAGCTGTGATGAACTAGATGGCTTAAGTTGCAATAGAAGTAGCAGTATCAAACCTTGTACTAGTCATTCAAGCTCTCGTGATAGCTCTCGTCTTAGCAATATACAAATTGCAATGATAGCTCTCGGATCTTCACTCTTAATTGTTTTTCTGCTTGTTGGGTTGGTTTATAAGTTTGTTTATAGCAGAAAAAACAAGCAAAAAGTTGAGACCTCTGATGAAGTAGGAATAACTTCCTTGCTGGTCGACAAGGTAATAAAAGCCACTAATAATCTAGATGAGCGTTTCGTCATTGGGAGAGGAGCACATGGAGTTGTTTATAAGGCTTCCCTTGATTCAAAGAGAACTTTTGCAGTAAAGAAGCTTACATTTGAAGGATGCAATGGGGGAAAGCAGAGTATGGTTAGAGAAATTCAAACTGTCGGTAACATCAAGCACCGGAACCTGATCGCTTTGGAAGATTTTTGGTTGGGAAATGACCATGGTCTATTACTTTATATATACCAGCCTAATGGGAGCCTTTATGATGTGTTGCATGAGATGAATCCAGCTCCAGCTCTAACATGGGAAGTCCGCCATAATATAGCCATTGGTATTGCATATGGATTAGCATATCTCCATTACGATTGTGATCCTCCTATAATACACCGAGACATCAAACCTCAGAATATACTTCTAGATTCGGAGATGGAGCCTCATATTGCTGATTTTGGTCTTGCAAAGCTGCTGGATAAGACTACTACACCAACAGCTTCATCTTCTTTTGCGGGTACAATTGGCTACATTGCACCAGGTATCCTTTACACATACATTATGAACTAG 3024 40.84 MYDTVGLLVSRRFLLLVCFSFHIYVVSGLTLDGLSLLSLQTRWTTQTPFVPVWNASDSTPCSWVGIQCDQNLRVITLNLSGYGVSGQLGPEIARLTQLRTVDLTTNDLSGAIPYGIGNCTHLEYLDLSLNQFGGEIPLSLTHLGNLTFLNFHTNVLTGAIPDSLFQILSLQYVYLSENNLNGSIPSNVGNLRQLLHLYLYGNQLSGTIPSSIGNCSQLVELILDHNQLVGVLPNSLNNLHNLVALGVSQNKLEGPIPLGSGGCQSLEYIDLSFNAYTGGIPAGLGNCSRLTTLVIINSSLTGHIPSSFGRLNKLSLLDLSRNQLSGNIPRELGACKSLKQLNLYVNQLEGHIPSELGLLSGLEVLQLFSNRLTGEIPISIWKIASLQHIIVYNNNLSGELPLVITALEHLKNISVFNNHFSGVIPQSLGLNSSLVQVEFTNNQFSGQIPPNLCSGKTLRVLNLGLNQFQGSVPSDIGTCLTLQRLILRRNNLTGVLPEFMRNHGLRFMDASENNLNGTIPSSLGNCINITSINLSNNKLTGLIPNELGNLVNLRSLSLSHNFLEGPLPSSLSHCTKLDEFDVGFNLLNGSVPHSLASWKVISTLILKENRLTGGIPNVLTELESLLLLDVGGNLFGGEIPSSIGALKNLFYSLNLSNNGLTGQIPSELKSLAMLEKLDISHNNLTGSLRILGELSTSVFELNISDNLFTGPVPQKLMKLLDSHPSSFLGNPELCISCDELDGLSCNRSSSIKPCTSHSSSRDSSRLSNIQIAMIALGSSLLIVFLLVGLVYKFVYSRKNKQKVETSDEVGITSLLVDKVIKATNNLDERFVIGRGAHGVVYKASLDSKRTFAVKKLTFEGCNGGKQSMVREIQTVGNIKHRNLIALEDFWLGNDHGLLLYIYQPNGSLYDVLHEMNPAPALTWEVRHNIAIGIAYGLAYLHYDCDPPIIHRDIKPQNILLDSEMEPHIADFGLAKLLDKTTTPTASSSFAGTIGYIAPGILYTYIMN 1007
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21191210 21194233 + Hsped.02g15950.1 Hepe02g1595 563096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1595 1007 Gene3D Ribonuclease Inhibitor 186 260 IPR032675 -
Hepe02g1595 1007 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 346 1000 - -
Hepe02g1595 1007 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 790 902 - -
Hepe02g1595 1007 Gene3D Ribonuclease Inhibitor 357 740 IPR032675 -
Hepe02g1595 1007 Gene3D Transferase(Phosphotransferase) domain 1 904 1006 - -
Hepe02g1595 1007 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Hepe02g1595 1007 SMART LRR_typ_2 359 383 IPR003591 -
Hepe02g1595 1007 SMART LRR_typ_2 216 238 IPR003591 -
Hepe02g1595 1007 SMART LRR_typ_2 671 694 IPR003591 -
Hepe02g1595 1007 SMART LRR_typ_2 143 167 IPR003591 -
Hepe02g1595 1007 SMART LRR_typ_2 95 119 IPR003591 -
Hepe02g1595 1007 SMART LRR_typ_2 311 335 IPR003591 -
Hepe02g1595 1007 SMART LRR_typ_2 191 215 IPR003591 -
Hepe02g1595 1007 SMART LRR_typ_2 550 574 IPR003591 -
Hepe02g1595 1007 SMART LRR_typ_2 622 646 IPR003591 -
Hepe02g1595 1007 Gene3D Ribonuclease Inhibitor 261 354 IPR032675 -
Hepe02g1595 1007 SUPERFAMILY RNI-like 77 427 - -
Hepe02g1595 1007 ProSitePatterns Protein kinases ATP-binding region signature. 832 855 IPR017441 GO:0005524(InterPro)
Hepe02g1595 1007 Pfam Protein kinase domain 831 1001 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1595 1007 PRINTS Leucine-rich repeat signature 314 327 - -
Hepe02g1595 1007 PRINTS Leucine-rich repeat signature 671 684 - -
Hepe02g1595 1007 FunFam Os07g0541700 protein 903 992 - -
Hepe02g1595 1007 SMART serkin_6 826 1007 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1595 1007 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 456 742 - -
Hepe02g1595 1007 Gene3D Ribonuclease Inhibitor 31 185 IPR032675 -
Hepe02g1595 1007 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 28 185 - -
Hepe02g1595 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 948 960 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1595 1007 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 186 280 - -
Hepe02g1595 1007 ProSiteProfiles Protein kinase domain profile. 826 1007 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1595 1007 Pfam Leucine rich repeat 288 348 IPR001611 GO:0005515(InterPro)
Hepe02g1595 1007 SUPERFAMILY RNI-like 413 722 - -
Hepe02g1595 1007 Pfam Leucine Rich Repeat 674 688 IPR001611 GO:0005515(InterPro)
Hepe02g1595 1007 Pfam Leucine Rich Repeat 552 574 IPR001611 GO:0005515(InterPro)
Hepe02g1595 1007 Pfam Leucine Rich Repeat 169 191 IPR001611 GO:0005515(InterPro)
Hepe02g1595 1007 Pfam Leucine Rich Repeat 528 550 IPR001611 GO:0005515(InterPro)
Hepe02g1595 1007 Pfam Leucine Rich Repeat 265 287 IPR001611 GO:0005515(InterPro)
Hepe02g1595 1007 Pfam Leucine Rich Repeat 505 526 IPR001611 GO:0005515(InterPro)
Hepe02g1595 1007 Pfam Leucine Rich Repeat 218 239 IPR001611 GO:0005515(InterPro)
Hepe02g1595 1007 Pfam Leucine Rich Repeat 121 143 IPR001611 GO:0005515(InterPro)
Hepe02g1595 1007 Pfam Leucine Rich Repeat 652 671 IPR001611 GO:0005515(InterPro)
Hepe02g1595 1007 Pfam Leucine Rich Repeat 194 215 IPR001611 GO:0005515(InterPro)
Hepe02g1595 1007 FunFam Piriformospora indica-insensitive protein 2 304 402 - -
Hepe02g1595 1007 Gene3D Phosphorylase Kinase; domain 1 789 902 - -
Hepe02g1595 1007 SUPERFAMILY Protein kinase-like (PK-like) 808 1004 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1595 Hepe-Chr2:21191210 Hepe01g1477 Hepe-Chr1:80076338 6.02e-46 dispersed
Hepe02g1594 Hepe-Chr2:21182977 Hepe02g1595 Hepe-Chr2:21191210 2.78e-151 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72570 PF00069 Pkinase 1.50E-33 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1595 K28089 - csv:101204561 1570.06