Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g1605 | ATGCAATTGGTACCAAATAATGATGAAGATCAAGATGATATTCTGGAACGTGCGCCCATTTTAAGTCAAGTGGATTTTCTGCCACAGTCTGTGGCATCAGCATCTTCTGCTGAGATTATTGCTATAGGGAGAGAGAGCTCCCTTAGTGACGATGATTTACACAATCTTATTGTTGATGAAACTTGTCATCTGGTGAATGCAGATCATCCACAATGTCGTATATGCCTTGACACTGGAGGAGAAGATTTAATTGCTCCTTGCCACTGCAAAGGCACTCAAAAGTATGTCCATAGATCATGTCTTGATAATTGGAGGTCCACAAAGGAGGGCTTTGCTTTCGCTCATTGTACAGAGTGCAGAGCTATGTTCGTGTTACGTGCAAATGTCCCTCCTGATCGCTGGTGGTTGAGACTGAAGTTTCAGTTTCTTGTTGCTAGGGACCATGCATTCATTTTCATCATTGTTCAACTGATTGTGGCATTCTTGGGGGTGTTGGTGTACAAATTCTACGGAGAGGAACTAAGGGAAATGTTTGGTTACGAAGAACACCCATATGGATTCTATGCCATGGCTGTCTTGGCTATCATCTTGGTTGGTTTACTCTATGGTTTCTTCATAGCCATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAACTGACAAAGGTCCAGTAA | 696 | 42.82 | MQLVPNNDEDQDDILERAPILSQVDFLPQSVASASSAEIIAIGRESSLSDDDLHNLIVDETCHLVNADHPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKVQ | 231 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 21332757 | 21337826 | - | Hsped.02g16050.1 | Hepe02g1605 | 563106 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g1605 | 231 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 190 | 229 | - | - | |
Hepe02g1605 | 231 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 64 | 126 | IPR011016 | GO:0008270(InterPro) | |
Hepe02g1605 | 231 | Pfam | RING-variant domain | 72 | 119 | IPR011016 | GO:0008270(InterPro) | |
Hepe02g1605 | 231 | SUPERFAMILY | RING/U-box | 67 | 123 | - | - | |
Hepe02g1605 | 231 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 65 | 124 | IPR013083 | - | |
Hepe02g1605 | 231 | SMART | ringv_2 | 71 | 120 | IPR011016 | GO:0008270(InterPro) | |
Hepe02g1605 | 231 | CDD | RING_CH-C4HC3_MARCH | 72 | 120 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1605 | Hepe-Chr2:21332757 | Hepe04g1468 | Hepe-Chr4:70300893 | 7.82e-40 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g1605 | - | - | - | 0.0 |