Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1605 ATGCAATTGGTACCAAATAATGATGAAGATCAAGATGATATTCTGGAACGTGCGCCCATTTTAAGTCAAGTGGATTTTCTGCCACAGTCTGTGGCATCAGCATCTTCTGCTGAGATTATTGCTATAGGGAGAGAGAGCTCCCTTAGTGACGATGATTTACACAATCTTATTGTTGATGAAACTTGTCATCTGGTGAATGCAGATCATCCACAATGTCGTATATGCCTTGACACTGGAGGAGAAGATTTAATTGCTCCTTGCCACTGCAAAGGCACTCAAAAGTATGTCCATAGATCATGTCTTGATAATTGGAGGTCCACAAAGGAGGGCTTTGCTTTCGCTCATTGTACAGAGTGCAGAGCTATGTTCGTGTTACGTGCAAATGTCCCTCCTGATCGCTGGTGGTTGAGACTGAAGTTTCAGTTTCTTGTTGCTAGGGACCATGCATTCATTTTCATCATTGTTCAACTGATTGTGGCATTCTTGGGGGTGTTGGTGTACAAATTCTACGGAGAGGAACTAAGGGAAATGTTTGGTTACGAAGAACACCCATATGGATTCTATGCCATGGCTGTCTTGGCTATCATCTTGGTTGGTTTACTCTATGGTTTCTTCATAGCCATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAACTGACAAAGGTCCAGTAA 696 42.82 MQLVPNNDEDQDDILERAPILSQVDFLPQSVASASSAEIIAIGRESSLSDDDLHNLIVDETCHLVNADHPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKVQ 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21332757 21337826 - Hsped.02g16050.1 Hepe02g1605 563106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1605 231 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 190 229 - -
Hepe02g1605 231 ProSiteProfiles Zinc finger RING-CH-type profile. 64 126 IPR011016 GO:0008270(InterPro)
Hepe02g1605 231 Pfam RING-variant domain 72 119 IPR011016 GO:0008270(InterPro)
Hepe02g1605 231 SUPERFAMILY RING/U-box 67 123 - -
Hepe02g1605 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 124 IPR013083 -
Hepe02g1605 231 SMART ringv_2 71 120 IPR011016 GO:0008270(InterPro)
Hepe02g1605 231 CDD RING_CH-C4HC3_MARCH 72 120 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1605 Hepe-Chr2:21332757 Hepe04g1468 Hepe-Chr4:70300893 7.82e-40 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1605 - - - 0.0