Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1614 ATGCCAACGGGCGTGCGCGTGGCGGGGCTTATGCGCGCACCACCCCCGACCAACGACCGCGCCGCTAATTCCCTGCTCTTGTTCTTGTTCTTGTTCTTGTTCCTCTCGTCGTCATGCAATATAATGCGAGTGGTTTCGTCGGCACCGACAGACACCGAAACTCTCCTTCAATTCAAGCGGTCGTTGACCGCGGCCTCGGCCCTTCACAATTGGAAGCCAACCGTCCCGCCTTGCGAGAACCACAAGTCGAATTGGGCGGGTGTGCTTTGTTTGAATGGCTACGTTAGGGGTCTACGACTCGAGAATATGGGACTTAAAGGCGAGGTTGATGTGAATTCCCTTGTTTCTTTGACTCATTTGAGAACCATAAGCTTGATGAACAACACCTTGGTTGGGACTTGGCCTCCTGTTATAAGCAAACTAGCGAATCTACGTTCGGTTTATCTTTCATATAATCACTTTTATGGAGAAATCCCAGATGATGCCTTTATGGGTTTGAAGTTTTTGAAGAAAGTGTTTTTGACCCATAATGAATTCACTGGTCAAATTCCTTCATCTCTGGCTTCATTGTCTAGGCTTATGGAATTGAGAATTGATGGAAACAAATTCAAAGGACCAGTCCCCAACCTGAAAATGGATACTTTGAAGAAACTTAATGTTTCCAACAATGAATTGGAGGGCCCTATACCTTCTTCCTTAAGCCAGATGGATCCTACCTGTTTTATAGGTAACTCGGACCTATGTGGGGATCCTCTTCCGTCGTGCGGACGAGCCTTATCATCGGCGGGGCTGCTAAGAATCGGGATAATATTGATAATCTTGGGGATAACATTAGCAGTGATAGCTTCAATTTGCATCATATTGAGTTTAAGGAGGAGGCAGCCTTCGTTGCAACTGGGGAAGACGAATAGCAAAAATGCAGGCAAGATGGAAGAGGAGAACAACAAGGCATACATGAGTAAGCCGGCGGCAGCGGTAGCGGTTCGAAGCCCGGAGTCGTCGGCGGCAGCAGCGGCGGCGAAGAGGGGATCGGCAGCGGAACACGGAAAACTGTTGTTCGTGAGAGAAGACAGAGAGAAATTCGACCTGCAGGATCTTCTTAGAGCGTCGGCTGAGATATTGGGAAGTGGGTCGTTTGGATCTTCGTACAAAGCAACTATACTTTGTAATGCGGTGGTGGTGAAGCGATATAAGCATATGAACAATGTGGGAAGAGAGGAGTTCCATGAGCATATGAGAAGGTTAGGGAGGTTGACGCATCCCAATTTACTGCCGTTGGTTGCTTATTATTATAGAAGGGAAGAGAAGCTCTTGATTTCTGACTTTGTTGCTAATGGGAGTTTGGCCAGCCGTCTGCATGGGAACCACAACGAGGATGAGCCAGGGCTAGATTGGGCGACGAGGTTAAAGATCATAAGAGGCATAGCGAGAGGGCTATCTTACCTCTACACTTCCCTACCGAGCATAATAGCTCCTCACGGCCATCTGAAATCATCAAACGTCCTACTAGACGACTCCTTCGACCCTCTCCTCACCGATTACGGCCTAATCCCGGTAGCGAACCTGGAGCACGGTCAGACACTAATGATGGCCTACAAATCACCGGAGCATGCGAGCATGGCACGCGTGACAAAGAAGACCGACGTGTGGAGCTTCGGGATCGTGATACTCGAGATGCTGACAGGGCGGTTCCCAGAGAACTACCTGACACGCAATCACGACACGAAATCGGACCTCGCGACGTGGGTGAACAACATGATCAAGGAAAAGAAGACGGGGATGGTTTTCGATACCGAGCTCGGGAAAGCGAGGGAGAGCGATAAAGGGGAGTTGTTGAAGATGCTGAAGATTGGTTTGAGTTGCTGTGAAGAAGATGTGGATAGAAGGTTGGATTTGAATCAGGTAATGACGCAAATTGAAGAGTTGAACGAAACGGATTTCAGTGATGATGGGGATACCGATGACTTTTCACCTACTTCTTCTCGCCACTCGCAAATTCCTGTTTCATGA 2010 48.56 MPTGVRVAGLMRAPPPTNDRAANSLLLFLFLFLFLSSSCNIMRVVSSAPTDTETLLQFKRSLTAASALHNWKPTVPPCENHKSNWAGVLCLNGYVRGLRLENMGLKGEVDVNSLVSLTHLRTISLMNNTLVGTWPPVISKLANLRSVYLSYNHFYGEIPDDAFMGLKFLKKVFLTHNEFTGQIPSSLASLSRLMELRIDGNKFKGPVPNLKMDTLKKLNVSNNELEGPIPSSLSQMDPTCFIGNSDLCGDPLPSCGRALSSAGLLRIGIILIILGITLAVIASICIILSLRRRQPSLQLGKTNSKNAGKMEEENNKAYMSKPAAAVAVRSPESSAAAAAAKRGSAAEHGKLLFVREDREKFDLQDLLRASAEILGSGSFGSSYKATILCNAVVVKRYKHMNNVGREEFHEHMRRLGRLTHPNLLPLVAYYYRREEKLLISDFVANGSLASRLHGNHNEDEPGLDWATRLKIIRGIARGLSYLYTSLPSIIAPHGHLKSSNVLLDDSFDPLLTDYGLIPVANLEHGQTLMMAYKSPEHASMARVTKKTDVWSFGIVILEMLTGRFPENYLTRNHDTKSDLATWVNNMIKEKKTGMVFDTELGKARESDKGELLKMLKIGLSCCEEDVDRRLDLNQVMTQIEELNETDFSDDGDTDDFSPTSSRHSQIPVS 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21473861 21477784 - Hsped.02g16140.1 Hepe02g1614 563115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1614 669 MobiDBLite consensus disorder prediction 644 669 - -
Hepe02g1614 669 Pfam Protein tyrosine and serine/threonine kinase 372 638 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1614 669 Gene3D Transferase(Phosphotransferase) domain 1 443 659 - -
Hepe02g1614 669 Gene3D Ribonuclease Inhibitor 166 258 IPR032675 -
Hepe02g1614 669 FunFam Pollen receptor-like kinase 1 443 653 - -
Hepe02g1614 669 FunFam Nuclear pore complex protein NUP107 48 209 - -
Hepe02g1614 669 Pfam Leucine rich repeat N-terminal domain 49 90 IPR013210 -
Hepe02g1614 669 Gene3D Ribonuclease Inhibitor 50 165 IPR032675 -
Hepe02g1614 669 FunFam pollen receptor-like kinase 1 337 442 - -
Hepe02g1614 669 Gene3D Phosphorylase Kinase; domain 1 333 442 - -
Hepe02g1614 669 ProSiteProfiles Protein kinase domain profile. 368 642 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1614 669 Pfam Leucine Rich Repeat 143 161 IPR001611 GO:0005515(InterPro)
Hepe02g1614 669 Pfam Leucine Rich Repeat 215 236 IPR001611 GO:0005515(InterPro)
Hepe02g1614 669 Pfam Leucine Rich Repeat 169 190 IPR001611 GO:0005515(InterPro)
Hepe02g1614 669 SUPERFAMILY Protein kinase-like (PK-like) 372 642 IPR011009 -
Hepe02g1614 669 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 46 644 IPR046959 -
Hepe02g1614 669 SUPERFAMILY L domain-like 49 236 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1614 Hepe-Chr2:21473861 Hepe10g0328 Hepe-Chr10:3500293 3.64e-125 dispersed
Hepe02g1614 Hepe-Chr2:21473861 Hepe09g0414 Hepe-Chr9:3727277 1.27e-153 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72572 PF07714 PK_Tyr_Ser-Thr 5.50E-28 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1614 K28077 - csv:101203276 957.592