Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g1651 | ATGCTTCCCAAATCCACCGGAATCCTCTGGCTCGACGGCGACCATGACGACGCCACTTCTTGGACCAGAACCACCAACCACCACCACCACCACGACGACATCTCCATTGCTGCCGCTTCCATTTCCTCTTTCAAATCCATGCTCGATTCCGACTGGTACATCAACTCTTCTACTACTAATCCTCCTCCTCCTCCTCCTCCTCTCAATCCTTCTCACCTTGATTTCCATTCCGACATTATTCGACATCTTCCTTTCTCCTCCAATCCTACTGATAACTTCCTCCTACACTCCATAGATTCCTCCTCTTCCTGCTCTCCTTCCCAGCCTTTTGCTCTCGATCCTTCCCATTCCCATTCCCACTCCATCTTGCCTCCTCATAAATCCTGTTTCTCTTCTCTTCTTAATGTCGTTTGCGGCACTAATTTTGATAATGCCTTCGATTTGCCCGGAGAAACTGCCCTGCTTGGATCTTACCAAGGGAATCAACCTTCCATGGGATTCACCGGCATTTCCTCTCTTCCTCTAATCGCTAATCAGGAACTTACCTTAAACAACTCCGACTTTCCGCTCGCCGATAATCCCCCCTCATTCGCCGCTGGATTTAATCCTGCACCTGCCTTCCAGAGCTTCGATGCCTGCGGGAATGCTCTGTTTCAGAACAGGTCTAAGGTTTTGAGACCTCTCCAAGTGTTCCCGCAGGTCGGCGCGCAGCCGACGCTCTTCCAGAAGCGGGCGGCGCATCGAGTTGGCTCTGCTGGAGTTGATAAACTGGAGAATTTGGAGGTTTCTGGTTTGAAATTAGGAGAAGGCTCCATGTGGACGCCGAATTTTGAGAAGCTGAGGAACAAGAACGGCGACGAGGACTTTGAGGACGGCAGCATGGATGTTTCTCGCTTCAATTACGATTCCGACGAAGCCAATGAGTATAATAAGCTGGAGGACAATGTTAATGCTAAAAACTGCGGAAGCAATTCCAATGCCAACAGTACTGTAACCGGCGGAGACCAGAAGGGGAAGAAGAAGGGGTTGCCGGCGAAAAATCTCATGGCGGAGCGGCGGCGGAGAAAGAAGCTTAATGATAGACTTTACATGCTTAGGTCCGTCGTACCCAAAATAAGCAAGATGGATAGAGCTTCAATACTTGGAGACGCCATTGATTACTTGAAGGAGCTTCTTCAAAGGATAAATGATCTTCATAATGAACTTGAGTCATCGACTCCTCCTGGTTCTTTGTTGCAGCCTTCTTCAAGCTTTCACCCTTTGACGCCGACTCTGCCGACTCTTCCCTGTCGTGTCAAAGAGGAGCTGTGTCCAAGCTCCTTGTCCAGCCCCAAAACACAGCCTGCAAGGGTTGAAGTCCGAGTCAGAGAAGGCAGGGCTGTCAATATTCACATGTTTTGTTCTCGCAAGCCGGGTCTATTGCTATCCACCATGAGGGCTCTGGATAACCTCGGCTTGGACATCCAACAAGCTGTAATCAGCTGTTTCAATGGATTTGCTTTAGACGTGTTTCGAGCTGAGCAATCCAAGGAAGGTCAGGAGATCTTACCTGAGCAAATAAAAGCAGTGCTGTTGGATTCAGCTGGTTTACATGGTGTTATTTAA | 1605 | 49.03 | MLPKSTGILWLDGDHDDATSWTRTTNHHHHHDDISIAAASISSFKSMLDSDWYINSSTTNPPPPPPPLNPSHLDFHSDIIRHLPFSSNPTDNFLLHSIDSSSSCSPSQPFALDPSHSHSHSILPPHKSCFSSLLNVVCGTNFDNAFDLPGETALLGSYQGNQPSMGFTGISSLPLIANQELTLNNSDFPLADNPPSFAAGFNPAPAFQSFDACGNALFQNRSKVLRPLQVFPQVGAQPTLFQKRAAHRVGSAGVDKLENLEVSGLKLGEGSMWTPNFEKLRNKNGDEDFEDGSMDVSRFNYDSDEANEYNKLEDNVNAKNCGSNSNANSTVTGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESSTPPGSLLQPSSSFHPLTPTLPTLPCRVKEELCPSSLSSPKTQPARVEVRVREGRAVNIHMFCSRKPGLLLSTMRALDNLGLDIQQAVISCFNGFALDVFRAEQSKEGQEILPEQIKAVLLDSAGLHGVI | 534 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 22340527 | 22343980 | - | Hsped.02g16510.1 | Hepe02g1651 | 563152 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g1651 | 534 | SMART | finulus | 348 | 397 | IPR011598 | GO:0046983(InterPro) | |
Hepe02g1651 | 534 | CDD | ACT_UUR-ACR-like | 463 | 523 | - | - | |
Hepe02g1651 | 534 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 342 | 391 | IPR011598 | GO:0046983(InterPro) | |
Hepe02g1651 | 534 | Pfam | Helix-loop-helix DNA-binding domain | 349 | 391 | IPR011598 | GO:0046983(InterPro) | |
Hepe02g1651 | 534 | MobiDBLite | consensus disorder prediction | 316 | 335 | - | - | |
Hepe02g1651 | 534 | ProSiteProfiles | ACT domain profile. | 462 | 534 | IPR002912 | - | |
Hepe02g1651 | 534 | MobiDBLite | consensus disorder prediction | 316 | 342 | - | - | |
Hepe02g1651 | 534 | Pfam | Plant bHLH transcription factor, ACT-like domain | 451 | 524 | IPR054502 | - | |
Hepe02g1651 | 534 | CDD | bHLH_AtAMS_like | 345 | 416 | - | - | |
Hepe02g1651 | 534 | FunFam | BHLH transcription factor | 338 | 406 | - | - | |
Hepe02g1651 | 534 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 299 | 529 | IPR051358 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER) | |
Hepe02g1651 | 534 | Gene3D | - | 336 | 406 | IPR036638 | GO:0046983(InterPro) | |
Hepe02g1651 | 534 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 345 | 415 | IPR036638 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1651 | Hepe-Chr2:22340527 | Hepe07g2082 | Hepe-Chr7:65083710 | 8.55e-152 | dispersed | |
Hepe02g1651 | Hepe-Chr2:22340527 | Hepe10g0404 | Hepe-Chr10:4507374 | 4.37e-40 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55053 | PF00010 | HLH | 2.20E-09 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g1651 | - | - | - | 0.0 |