Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1660 ATGGCGGCCATCTCAGAAACTAACTCCCATTCGTCTCTAATCCCTAATTTCCTCTACTCGTCTTCAGCCATTCCATTCCAGAAGATCCTCTCCTCGAATTTTCCTTCTGGATCGCCATCGCCGATCGTCGAAGAAGCTGCATCTTCCTCCGCTTCGATGAAGGATTTTGCGATTCCCTCTCCAAGTGAATCGAGAAAGAAATTGGAGATGTATTCGCCGGCTTTCTACGCCGCCTGTGCAATCGGTGGAAGCCTTAGCTGTGGTCTCACTCACATGGCCGTCACTCCTCTCGATCTCGTCAAGTGCAATATGCAGATTGACCCTATGAAATACAAGACTATTTCATCTGGTTTTGGAGTTCTGCTAAAAGAACAGGGGATCAGAGGCTTCTTTAGGGGTTGGGCACCAACTCTACTAGGTTACAGCGCTCAGGGTGCTTGCAAATATGGAATCTACGAATTCTTTAAGAAATACTATTCCGACATAGCTGGTCCAGAGTATGCAGCAAAATACAAGACATTGATCTATCTTGCTGGCTCTGCATCTGCTGAAGTGATTGCAGATGTTGCACTTTGCCCCTTTGAAGCTGTTAAAGTTAGAGTTCAAACTCAGCCAGGTTTTGCCAGAGGTTTGTCAGATGGCCTTCCCAAATTTGTCAGATCTGAGGGTGCCCTTGGGTTGTATAAGGGCATTGTTCCTCTGTGGGGGCGTCAGATCCCATATACAATGATGAAGTTTGCAACATTTGAGAACCTGGTGGAGATGATCTACAAGCATGCCATCCCCAAGCCAAAGCACGAATGCAGCAGCGCCTTGCAGCTCAGCGTTAGCTTTACTGCTGGATATATTGCGGGTGTCTCTTGTGCTATAGTTTCTCACCCTGCTGATAATCTCGTCTCATTTCTCAATAATGCTAAAGGGGCTACCGTTGCTGATGCTGTTGAGAAGCTAGGATTATGGGGTCTCTTCACACGAGGGTTGCCTCTACGTATAGTTATGGTTGGAACCCTGACTGGAGCTCAGTGGGTTATCTACGACGCATTCAAAGTTTTTGTTGGATTGCCAACTACCGGTGGGGTTGCCCCCACCGCCACCGCCACCGCCATTGCCGCATAG 1116 48.03 MAAISETNSHSSLIPNFLYSSSAIPFQKILSSNFPSGSPSPIVEEAASSSASMKDFAIPSPSESRKKLEMYSPAFYAACAIGGSLSCGLTHMAVTPLDLVKCNMQIDPMKYKTISSGFGVLLKEQGIRGFFRGWAPTLLGYSAQGACKYGIYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFATFENLVEMIYKHAIPKPKHECSSALQLSVSFTAGYIAGVSCAIVSHPADNLVSFLNNAKGATVADAVEKLGLWGLFTRGLPLRIVMVGTLTGAQWVIYDAFKVFVGLPTTGGVAPTATATAIAA 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22470011 22474020 + Hsped.02g16600.1 Hepe02g1660 563161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1660 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 158 IPR018108 -
Hepe02g1660 371 Pfam Mitochondrial carrier protein 76 161 IPR018108 -
Hepe02g1660 371 Pfam Mitochondrial carrier protein 172 259 IPR018108 -
Hepe02g1660 371 Gene3D Mitochondrial carrier domain 75 352 IPR023395 -
Hepe02g1660 371 FunFam Phosphate carrier protein, mitochondrial 74 352 - -
Hepe02g1660 371 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 57 361 IPR044677 GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Hepe02g1660 371 SUPERFAMILY Mitochondrial carrier 76 347 IPR023395 -
Hepe02g1660 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 171 255 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0359 Hepe-Chr2:3367072 Hepe02g1660 Hepe-Chr2:22470011 5.06e-107 dispersed
Hepe02g1660 Hepe-Chr2:22470011 Hepe07g1011 Hepe-Chr7:14272084 5.23e-22 dispersed
Hepe02g1660 Hepe-Chr2:22470011 Hepe02g2492 Hepe-Chr2:71495839 1.58e-204 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1660 K15102 - csv:101203018 600.897