Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1690 ATGGATCCTAAAACCTCATCAACAACAAAAACAAAGCAACCCCAAGAACAACTGGTGGTACCCATACCCAACTTTCTGAACCTTCCTCAAGAAAAATCAATCATGGGTGAAAACAAACCAGCTGAAATCAAAGATTTTCAAATAGCAATTGCTGAGAAAGATGAGGGCAAGAAACAGTTAGCCCCAAAAAGAACCTCCAACAAAGACCGTCACACCAAAGTGGAAGGCCGTGGCCGAAGAATCCGGATGCCTGCTCTATGTGCGGCTAGGATTTTTCAATTGACCAGGGAATTAGGTCATAAATCCGACGGCGAGACTATCCAGTGGCTACTGCAGCAGGCGGAGCCGTCGATAATAGCCGCCACTGGTACTGGAACCATCCCTGCTTCAGCCCTAGCTGCGGCGGCGGGTTCTGTTTCTCAACAGGGGGCTTCTCTTTCCGCTGGATTGCAGCAGAAATTGGAGGAATTAGGCGGTGGCGGGTCCAGTAGGGCCAATTGGGGGAATTTGGGGAGACCCCATTTGGGCGCCACAGCCACAGGGCTTTGGCCCTCTTCTGTCAGTGGATTAGGGTTTCAGTCATCAACTGGTATTGGTATTGCTCAATCAGCTTCTAATTTAGCTAATGAAACTTCAAATTACTTTCACAAACTTGGGTTCCCACCTTTTGACTTACCACCCCAAACCAACATGGGTCAAATGAGTTTCACCTCCATTTTAGGTGGAAACTCCCAACACTTACCTGGTTTGGAGCTTGGATTGTCCCAAGATGGCCATATTGGAGTTATAAATCCTCAGGCATTGAACCAGATTTACCAACAGATGGGACAAGCTAGAGTTCATCAACATCAACACCAACATCAACACCATCATCAGCAGCAGCCTTCTGCTAAGGATGATTCTCAAGATTCAGGGTAG 918 47.39 MDPKTSSTTKTKQPQEQLVVPIPNFLNLPQEKSIMGENKPAEIKDFQIAIAEKDEGKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAAGSVSQQGASLSAGLQQKLEELGGGGSSRANWGNLGRPHLGATATGLWPSSVSGLGFQSSTGIGIAQSASNLANETSNYFHKLGFPPFDLPPQTNMGQMSFTSILGGNSQHLPGLELGLSQDGHIGVINPQALNQIYQQMGQARVHQHQHQHQHHHQQQPSAKDDSQDSG 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22930282 22931199 - Hsped.02g16900.1 Hepe02g1690 563191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1690 305 ProSiteProfiles TCP domain profile. 67 121 IPR017887 -
Hepe02g1690 305 MobiDBLite consensus disorder prediction 54 75 - -
Hepe02g1690 305 Pfam TCP family transcription factor 65 277 IPR017887 -
Hepe02g1690 305 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 58 297 IPR005333 GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Hepe02g1690 305 MobiDBLite consensus disorder prediction 275 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1690 Hepe-Chr2:22930282 Hepe09g0125 Hepe-Chr9:998999 2.10e-36 dispersed
Hepe02g1690 Hepe-Chr2:22930282 Hepe03g1140 Hepe-Chr3:64607099 1.05e-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55056 PF03634 TCP 2.10E-30 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1690 - - - 0.0