Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1709 ATGGGGAAGAACGAATTTCTAACCCCTAAAGCGATTGCGAATAGAATCAAGGCAAAAGGGCTCCAGAAGCTCAGATGGTATTGCCAGATGTGTCAAAAGCAGTGCCGTGATGAGAATGGCTTTAAATGTCACTGTATGAGTGAAAGCCACCAGCGCCAAATGCAGATCTTTGGCCAAAATCCCCATCGTATTGTTGAAGGTTACTCTGAAGAGTTCGAGAGTTCTTTTATGGAGCACATTAAGCGTACCCATCGGTTCAGTCGCGTGGCAGCTACAGTCGTCTACAATGAATACATTAACGACAGACATCATGTTCATATGAATTCAACGGAGTGGGCTACTCTCACCGATTTTGTAAAACATTTGGGTCGAACTGGTCAGTGTAAGGTAGAGGAGACTCCCAAGGGTTGGTTCATTACTTACGTAGATAGAGATTCAGAGACCCTTTTTAAAGAGAGAATGAAAAATAAGAGGGTGAGAGCAGATTTAGCTGAAGAAGAGAAGCAAGAGAGAGAGATCAAGAGGCAAATTGAGAGGGCTGAGCAATTAGCCCCTTTGGCTTCTGCATCTGGTGAGCCTTTGGAGGCTGAGCAAACGAGAGAGTTGAATTTGGAGAGTGGGGTTAAGCTAGGATTTGCTTTGGGAGGAACAACATCAAAATTGAAGGAGAAGGGAGAGAGTTCCAGGGGGATTTTTGATGAGGATGAGACAGATGAGAAGACTGCGAAGGGGAAAATCGGAGAGACTTCCAAAAACAAGATGGGTGCTGGCAGTGGTCTATCGGCTTTGGAGGCGTTGATGAGAGAAGAAGAGATGAAGAAGGAGAAGATTAATAGGAAGGATTACTGGCTGTGTGAGGGAATAACTGTAAAGGTCATGAGTAAGAATTTGGCTGAGAAGGGATACTATAAACAGAAGGGAGTTGTGCGAAAAGTGATTGATAAATATGTTGGAGAAATCGAAATGATCGATGGCAAGCATGTGTTGAGAGTTGATCAAGAAGAATTAGAAACAGTGATACCACAAATTGGTGGCTTAGTAAGGATTGTAAATGGGGCATATCGTGGATCAAAGGGTAGGTTGTTGGGCGTTGACACTGATAAGTTTTGTGCGAAAGTGCAAATAGAAAAGGGTGTGTACGATGGCAGGGTGCTTAAGGCTGTTGAATATGAAGATATCTGTAAACTTGCATAG 1194 43.47 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGQNPHRIVEGYSEEFESSFMEHIKRTHRFSRVAATVVYNEYINDRHHVHMNSTEWATLTDFVKHLGRTGQCKVEETPKGWFITYVDRDSETLFKERMKNKRVRADLAEEEKQEREIKRQIERAEQLAPLASASGEPLEAEQTRELNLESGVKLGFALGGTTSKLKEKGESSRGIFDEDETDEKTAKGKIGETSKNKMGAGSGLSALEALMREEEMKKEKINRKDYWLCEGITVKVMSKNLAEKGYYKQKGVVRKVIDKYVGEIEMIDGKHVLRVDQEELETVIPQIGGLVRIVNGAYRGSKGRLLGVDTDKFCAKVQIEKGVYDGRVLKAVEYEDICKLA 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23292816 23294009 - Hsped.02g17090.1 Hepe02g1709 563210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1709 397 Gene3D - 287 340 - -
Hepe02g1709 397 SMART Kin17_mid_2 52 178 IPR019447 -
Hepe02g1709 397 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 397 IPR037321 GO:0003690(PANTHER)|GO:0005634(PANTHER)|GO:0006260(PANTHER)|GO:0006974(PANTHER)
Hepe02g1709 397 MobiDBLite consensus disorder prediction 220 256 - -
Hepe02g1709 397 MobiDBLite consensus disorder prediction 222 247 - -
Hepe02g1709 397 CDD KOW_KIN17 343 396 IPR041995 -
Hepe02g1709 397 Gene3D - 341 397 IPR014722 -
Hepe02g1709 397 Gene3D - 60 160 IPR038254 -
Hepe02g1709 397 FunFam DNA/RNA-binding protein kin17-like 287 340 - -
Hepe02g1709 397 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Hepe02g1709 397 SUPERFAMILY beta-beta-alpha zinc fingers 26 66 IPR036236 -
Hepe02g1709 397 Coils Coil 154 183 - -
Hepe02g1709 397 Coils Coil 260 280 - -
Hepe02g1709 397 FunFam DNA/RNA-binding protein KIN17, putative 61 160 - -
Hepe02g1709 397 FunFam DNA/RNA-binding protein KIN17, putative 341 397 - -
Hepe02g1709 397 Pfam KN17 SH3-like C-terminal domain 279 332 IPR041330 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1709 K13102 - csv:101216499 714.916