Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1774 ATGGGTTCTGGTAATGGGTTTTATTCGACTACTGAATTCAATTTGGATGCCAAATGGTTGATTGATCCTAAACATCTTTTTGTTGGGCCGAAGATTGGGGAAGGTGCCCATGCCAAGGTGTATGAGGGAAAGTACAAAAACCAGATTGTGGCTATCAAAATGGTGGGTAAAGGAGATACTCCTGAGAGGATGGCCAGAAGAGAAGCTCGGTTTGCCAGAGAGGTTGCAATGTTGTCCAAAGTGAAACACAAGAACTTAGTGAAGTTTATTGGCGCTTGCAAGGAACCTATGATGGTTATAGTGACTGAATTACTCACAGGTGGTACATTGCGCAAATATCTCTTGAATTTGAGGCCAAGGAGCTTGGAACTTGATGTGGCAATCGGGTTTGCGCTTGATATTGCTCGCGCAATGGAGTGTTTACACTCCCATGGGATTATTCACCGTGATCTTAAACCAGAGAACTTGATATTGACTGCAGACCATAAAACAGTTAAGCTTGCTGATTTTGGTTTGGCAAGAGAAGAATCAGTAACAGAGATGATGACTGCAGAAACAGGAACATATAGGTGGATGGCTCCAGAGCTCTACAGCACAGTCACTTTAAAACATGGAGATAAAAAGCATTACAATCATAAAGTTGATGCCTACAGCTTTGCAATTGTATTGTGGGAGCTCATCCTTAACAGGTTGCCTTTCGAAGGCATGTCGAATTTACAGGCAGCCTATGCAGCTGCTTTTAAGGTAAGCTTGATGTCTTATAGGGCAATGGAAGGTCCTTTCCTATGA 789 42.71 MGSGNGFYSTTEFNLDAKWLIDPKHLFVGPKIGEGAHAKVYEGKYKNQIVAIKMVGKGDTPERMARREARFAREVAMLSKVKHKNLVKFIGACKEPMMVIVTELLTGGTLRKYLLNLRPRSLELDVAIGFALDIARAMECLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLKHGDKKHYNHKVDAYSFAIVLWELILNRLPFEGMSNLQAAYAAAFKVSLMSYRAMEGPFL 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25411598 25415323 - Hsped.02g17740.1 Hepe02g1774 563275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1774 262 CDD STKc_MAP3K-like 32 248 - -
Hepe02g1774 262 FunFam Kinase suppressor of Ras 1 15 105 - -
Hepe02g1774 262 PANTHER SERINE-THREONINE PROTEIN KINASE 20 247 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe02g1774 262 ProSiteProfiles Protein kinase domain profile. 26 262 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1774 262 PIRSF ILK 10 255 - -
Hepe02g1774 262 Gene3D Transferase(Phosphotransferase) domain 1 106 256 - -
Hepe02g1774 262 ProSitePatterns Protein kinases ATP-binding region signature. 32 57 IPR017441 GO:0005524(InterPro)
Hepe02g1774 262 SMART serkin_6 26 262 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1774 262 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1774 262 SUPERFAMILY Protein kinase-like (PK-like) 15 246 IPR011009 -
Hepe02g1774 262 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Hepe02g1774 262 Pfam Protein kinase domain 30 243 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1774 Hepe-Chr2:25411598 Hepe09g0241 Hepe-Chr9:2088187 1.23e-152 dispersed
Hepe02g1774 Hepe-Chr2:25411598 Hepe02g3073 Hepe-Chr2:79888743 6.36e-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72573 PF00069 Pkinase 3.80E-48 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1774 - - - 0.0