Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1784 ATGGCGGGTCTTGAGGAACTTAAGAAGAAACTTACTCCATTGTTTGATGCTGAAAAGGGCCTGTCTATGGATTCCCCTGTGGACCCTTCCGATTCCTATACGTTTTCAGACAATGGGACTGTTAATTTGCTGAGCCGATCATATGGGGTTTACAATTTCAATGAGCTAGGGTTACAAAAATGCACGTCTTGGCTCACCGACGATTCGGGGAGTAGTGAGAGGACATATCGTTGTGCTTCCCGTGAAATGAGGATATTTGGAGCCATTGGTAGTGGTGCTAGCAGTGTTGTTCAGAGAGCTATCCACATTCCTGCTCATCGAATCATGGCTTTGAAGAAGATTAATATATTTGAAAAGGAGAAAAGACAGCAGCTTCTTACTGAGATAAGGACACTATGTGAAGCCCCCTGTTCCGAGGGTCTCGTGGAGTTTCATGGAGCATTTTATACCCCCGACTCTGGACAAATAAGCATAGCTTTGGAGTACATGGATGGAGGGTCGTTGGCAGATGTCCTGCATTTGAAGAAATGTATACCCGAGCCTGTTCTTTCATCTATGTTTCAGAAACTTCTTCGTGGTCTAAGCTACTTGCATGGAGAAAGACATTTGGTTCACAGAGATATAAAGCCAGCTAATTTACTTGTAAATCTAAAGGGTGAAGCGAAAATTACGGATTTCGGCATAAGTGCTGGCTTAGAGAATTCGATGGCAATGTGTGCTACTTTCGTCGGAACTGTCACATACATGTCGCCAGAGCGAATTCGAAACGAGAGCTATTCTTATCCGGCTGATATCTGGAGCCTAGGGCTTGCACTCTTTGAGTGTGGTACTGGTGAATTTCCATATTCAGCTACTGAAGGTCTAGTGAACCTTATGTTGCAGATTTTGGATGACCCATCTCCATCGCCGTCAAAACATAAGTTTTCACCAGAGTTTTGCTCGTTTGTCGATGCCTGCTTGCAGAAAGATGCAGATGCTAGGCCAACGGCAGAGCAGCTGCTTTCACACCCATTTATCAAAAAATATGAGGATGAACAAGTAGACTTGGCAGCATTTGTCCAGAATGTGTTTGATCCAATACAGAGGATGAAGGACTTGGCAGATATGTTGGCAATTCATTATTACTTGCTTTTTGATGGACCTGATGAATTCTGGCACCATACAAAAGCTTTGTACCATGAAAGCTCAACTTTGAGTTTCTCAGGGAAGCAATTTTCTGGTCCAAATGATATCTTTGCCAAACTATCAGACATCCGAACTACATTAGCGGGAGACTGGCCTCTTGAAAAACTAGTTCACGTCGTCGAAAAACTCCAATGTCGAGCTCACGGTCGAGATGGAGTTGCCATAAGGGTGTCGGGATCCTTCATCATTGGAAATCAGTTCCTCATATGTGGAGATGGTGTACAAGTAGAGGGATTGCCAAATTTTAAGGATCTCTCGATCGACATGGCGAGTAAGAAAATGGGATCCTTCCGGGAGCAATTCATCATCGAACCGAGCAACCTCATCGGTCGCTACTTCATAGCCAAACAAGAGCTTTATATAATTCAATAG 1557 43.8 MAGLEELKKKLTPLFDAEKGLSMDSPVDPSDSYTFSDNGTVNLLSRSYGVYNFNELGLQKCTSWLTDDSGSSERTYRCASREMRIFGAIGSGASSVVQRAIHIPAHRIMALKKINIFEKEKRQQLLTEIRTLCEAPCSEGLVEFHGAFYTPDSGQISIALEYMDGGSLADVLHLKKCIPEPVLSSMFQKLLRGLSYLHGERHLVHRDIKPANLLVNLKGEAKITDFGISAGLENSMAMCATFVGTVTYMSPERIRNESYSYPADIWSLGLALFECGTGEFPYSATEGLVNLMLQILDDPSPSPSKHKFSPEFCSFVDACLQKDADARPTAEQLLSHPFIKKYEDEQVDLAAFVQNVFDPIQRMKDLADMLAIHYYLLFDGPDEFWHHTKALYHESSTLSFSGKQFSGPNDIFAKLSDIRTTLAGDWPLEKLVHVVEKLQCRAHGRDGVAIRVSGSFIIGNQFLICGDGVQVEGLPNFKDLSIDMASKKMGSFREQFIIEPSNLIGRYFIAKQELYIIQ 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25901475 25906872 - Hsped.02g17840.1 Hepe02g1784 563285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1784 518 SUPERFAMILY NTF2-like 364 516 IPR032710 -
Hepe02g1784 518 Gene3D - 366 516 - -
Hepe02g1784 518 ProSiteProfiles Protein kinase domain profile. 83 339 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1784 518 ProSiteProfiles Nuclear transport factor 2 domain profile. 366 516 IPR018222 -
Hepe02g1784 518 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 63 372 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Hepe02g1784 518 CDD PKc_MAPKK_plant_like 84 343 - -
Hepe02g1784 518 Pfam Protein kinase domain 87 339 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1784 518 FunFam Mitogen-activated protein kinase kinase 3 363 517 - -
Hepe02g1784 518 SUPERFAMILY Protein kinase-like (PK-like) 85 366 IPR011009 -
Hepe02g1784 518 Gene3D Transferase(Phosphotransferase) domain 1 165 365 - -
Hepe02g1784 518 FunFam mitogen-activated protein kinase kinase 3 56 164 - -
Hepe02g1784 518 FunFam mitogen-activated protein kinase kinase 3 165 361 - -
Hepe02g1784 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1784 518 SMART serkin_6 83 339 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1784 518 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524(InterPro)
Hepe02g1784 518 Gene3D Phosphorylase Kinase; domain 1 57 164 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1784 Hepe-Chr2:25901475 Hepe08g2630 Hepe-Chr8:68262406 7.82e-77 dispersed
Hepe02g1587 Hepe-Chr2:21058760 Hepe02g1784 Hepe-Chr2:25901475 9.33e-44 transposed
Hepe02g1784 Hepe-Chr2:25901475 Hepe05g1338 Hepe-Chr5:61764598 4.10e-17 wgd
Hepe02g1784 Hepe-Chr2:25901475 Hepe06g0686 Hepe-Chr6:50954140 2.69e-30 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72575 PF00069 Pkinase 5.90E-60 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1784 K20607 - csv:101217978 1004.59