Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1796 ATGATTTCCATTTCCATCATCTTCTTCTTCTTCTTCTTCTCTGTTTCTCTCTCAGATCCTCGAATCTCCGAATCGGGAACCATCTGCGGCACCTTCAAGGCTCCACGAACCTCCAGATTCATCCCAACCTTCATCGAAGAAATGGAAGCCATATCCTCGCTTCTCACAACTCGGAGATGGACCACTCACTTCGTCAATTCGACGCCCCCAATGTTCGCCCTCTCTCAATGCTTCGACGATCTCTCCCACACCGATTGCCTCCTCTGCTACGCCGCCAGCCGCACCGCTCTCCCACGGTGCCTCCCCGCCGTCGCCGCACGGATCTACCTCGACGGATGCTTCCTCAGGTACGATAACTACAGTTTCTACAGAGAAGCCACCGATCCGGATCGGGACTCGGTGAATTGCGATTCGAAATTGGGGGAAATCGTGGAATCTGAGAGGTTAGGGTTGGGGGAGAATGTTAGGGTTGTTGTTGAGGCGGTGATGAGGATGGCGATGGAGAAGGGGGGATTTGGGATTGGGGAAGCGAATGGAATGTTTGGATTGGCGCAGTGTTGGGGGAGTGTTGTGGATGAGGATTGTAGGGTTTGTTTGGAGAAGGCGAAGAGGACGATTGGAAGTTGCTTGCCGAGTAGAGAAGGAAGGGCTTTGAATGCTGGCTGTTATTTGAGATATTCCACTCTCAAATTCTTTAATCATCAGGATCAACAACCTCATCATCATGGATTTTCTGGAAGAGGAGCTGTAGTTGCCATTGTCTTAGCCTCGGCTGCGTCCCTCATCATTTCCTCTTCTGCCGTTTTTGCATGTTATACAAGAATATCAAACTTCAAGAAAGAGAAGAAAAAACAATCCCTCATTCCAATTTCCTTTAAGGAATCCAATTTGAATTTCAAGTATGAAGCACTTGAAAAGGCAACTGATTACTTCAACCCATCAAATAAGCTAGGCCAAGGTGGAGCTGGGTGTGTATATAAAGGAACTCTTCCAAATGGACAGATTGTTGCTGTCAAGAGATTGGTTTTCCATACAAGCCAATGGGTTCAGGAGTTCTTCAATGAGGTCAATTTGATCCAAGGAATCCAACACAAAAACCTTGTTCCTCTTTTAGGTTGCAGCATCGAAGGCCCCGAAAGTCTCCTCGTCTACGACTACGTTCCCAATCTCAGCCTCGATCGCTTCATTTTCGAGAAGAACAAGGTTCAAATCCTAAATTGGAAGCAGCGTTTCAACATTATTGTGGGAACAGCTGAAGGACTTGCACATCTTCATGAAGGTTGTAAAATAAGAATAATTCATAGAGACATAAAGAGTAGCAATGTTCTACTAGATGAAAATTTTAATCCAAAAATTGCGGATTTTGGCCTCGCTCGGCATTTTGCAGCCGATCAGACTCATCTTAGCACGGGAATTGCTGGGACACTAGGGTACATGGCTCCTGAATATCTCGTTCGAGGACAACTTACAGAAAAGGCAGACGTTTATAGTTTTGGAGTGTTGATACTCGAGATCGTCTGTGGTAGAAGAAACAGTTCCTTCACAGAGAACTCTACCCCACTCCTCCAAACGGTTTGGGATCTATACAAATCAGAGAGATTAACCGAAGCCATTGACACATGCCTGAACAAGGATTACCCTACAAAAGAGGCCATGGATGTTCTGCAAATAGGGCTTTTATGCACACAAGCTCTAGCGTCTTCGAGACCGTCAATGGCAACGATAGCGAAACTGCTAACCGGTGAAGGAGAAAGGAAAGTTGGGATCCCAGAACAACCTCCATTTCTGAATCCCTGTGGACCCTCAAGAAGGTCTTGCAGAATTAGCAGCTTGGTTTCTCATGCAGTTTCCAAACTTGAAGTTTCTTCTTGCACATCAAGTTCTTCTAATTTGCCTTCAAGAAGTGGAGATTTTACTGAACTGAATTCAAACTGA 1935 45.74 MISISIIFFFFFFSVSLSDPRISESGTICGTFKAPRTSRFIPTFIEEMEAISSLLTTRRWTTHFVNSTPPMFALSQCFDDLSHTDCLLCYAASRTALPRCLPAVAARIYLDGCFLRYDNYSFYREATDPDRDSVNCDSKLGEIVESERLGLGENVRVVVEAVMRMAMEKGGFGIGEANGMFGLAQCWGSVVDEDCRVCLEKAKRTIGSCLPSREGRALNAGCYLRYSTLKFFNHQDQQPHHHGFSGRGAVVAIVLASAASLIISSSAVFACYTRISNFKKEKKKQSLIPISFKESNLNFKYEALEKATDYFNPSNKLGQGGAGCVYKGTLPNGQIVAVKRLVFHTSQWVQEFFNEVNLIQGIQHKNLVPLLGCSIEGPESLLVYDYVPNLSLDRFIFEKNKVQILNWKQRFNIIVGTAEGLAHLHEGCKIRIIHRDIKSSNVLLDENFNPKIADFGLARHFAADQTHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSFGVLILEIVCGRRNSSFTENSTPLLQTVWDLYKSERLTEAIDTCLNKDYPTKEAMDVLQIGLLCTQALASSRPSMATIAKLLTGEGERKVGIPEQPPFLNPCGPSRRSCRISSLVSHAVSKLEVSSCTSSSSNLPSRSGDFTELNSN 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26592070 26597278 - Hsped.02g17960.1 Hepe02g1796 563297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1796 644 FunFam Cysteine-rich receptor-like protein kinase 42 48 122 - -
Hepe02g1796 644 ProSiteProfiles Gnk2-homologous domain profile. 22 122 IPR002902 -
Hepe02g1796 644 SUPERFAMILY Protein kinase-like (PK-like) 287 579 IPR011009 -
Hepe02g1796 644 FunFam Cysteine-rich receptor-like protein kinase 3 134 231 - -
Hepe02g1796 644 Gene3D - 153 231 IPR038408 -
Hepe02g1796 644 Gene3D - 28 122 IPR038408 -
Hepe02g1796 644 FunFam Cysteine-rich receptor-like protein kinase 2 278 386 - -
Hepe02g1796 644 MobiDBLite consensus disorder prediction 624 644 - -
Hepe02g1796 644 Gene3D Transferase(Phosphotransferase) domain 1 387 587 - -
Hepe02g1796 644 SMART serkin_6 311 560 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1796 644 CDD STKc_IRAK 317 581 - -
Hepe02g1796 644 ProSiteProfiles Gnk2-homologous domain profile. 131 231 IPR002902 -
Hepe02g1796 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1796 644 FunFam Cysteine-rich receptor-like protein kinase 2 387 587 - -
Hepe02g1796 644 Gene3D Phosphorylase Kinase; domain 1 271 386 - -
Hepe02g1796 644 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 169 611 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Hepe02g1796 644 Pfam Salt stress response/antifungal 156 228 IPR002902 -
Hepe02g1796 644 Pfam Salt stress response/antifungal 46 120 IPR002902 -
Hepe02g1796 644 Pfam Protein kinase domain 313 574 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1796 644 ProSiteProfiles Protein kinase domain profile. 311 596 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1796 Hepe-Chr2:26592070 Hepe10g1621 Hepe-Chr10:52927749 7.15e-182 dispersed
Hepe06g1896 Hepe-Chr6:70156900 Hepe02g1796 Hepe-Chr2:26592070 8.45e-06 dispersed
Hepe02g1796 Hepe-Chr2:26592070 Hepe09g0235 Hepe-Chr9:2049108 1.48e-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72576 PF00069 Pkinase 2.20E-44 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1796 - - - 0.0