Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1817 ATGCGTCATCTTCATCGTTTTCGTCGTCTTACTACATGCCAGATTGATCGCCAACTGATTCCGTGTCGTTTCTGTTCATTTGATTTCGATTCTGATACCTTCATCGCTGGAGTTCTTGACTCCTGGATCATAGTAGCTTTGGTGGTGGTTCAATGTGAAAAGACAATTGGATTGCAGTTTGATCATCAAAACAGCGAAGATGTTACGTCGTGTTACTTCAGGGTCATGGGTAATGCGCCAGAGAAGAGATATCCTGTGAACTCAAAATATTATAAGTTATACGAAGAAGTTGGTGAGGGTGTTAGTGCAACCGTGTACAGGGCTCTTTGTGTTCCATTAAATGAGATTGTTGCCATTAAGGTTCTTGACTTAGACAGGTGCAATAATGACCTGGAAGGTACTCGTCGAGAAGTAAACACAATGACCTTGATTAATCATACCAATGTATTGCGAGCACATTGTTCTTTCACTACTGGTCACAACCTTTGGATAGTGATGCCATACATGGCTGGAGGATCATGCCTTCATATAATGAAATTGGCCCATCCAGAAGGACTTGAGGAGCCTGTTATTGCTATTTTGTTGCGTGAAGTTCTCAAAGCTCTTGTTTATCTTCATTCCCATGGTCACATTCATCGAGACGTGAAGGCTGGGAATATTTTAATTGATTCAAATGGTGCAGTCAAGCTAGCTGATTTTGGAGTGTCAGCCAGTATCTTTGATGCTGGAGATCGACAACGTTCAAGAAATACTTTTGTGGGAACTCCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTGCATGGATATGACTTCAGGGCAGACATTTGGTCATTTGGAATAACAGCGCTTGAACTTGCTCATGGCCATGCCCCATTTTCCAAGTATCCACCTATGAAGGTTTTGCTGATGACCTTACAAAATGCACCTCCTGGTCTTCATTATGAACGAGACAAGAGATTCTCAAAGTCATTTAAAGAAATGGTAGCCGCATGCCTTGTGAAGGATCCAAAAAAACGTCCTGAAGCAGAGAAGCTTCTAAAGCATCCATTTTTCAAACAAGGACAACCAAATGAATATCTTGTTCGCACCATTCTTCATGGCCTTCCTTCTCTAGAGGACCGCTTCAAGATGCTGAAGGCAAAAGAGGCTGAGCTTCTTGGGCAAAACAAGACTCTATATGGAGATAAAGAGCAACTGTCACAGAAAGAGTATATTCGAGGAGTGAGTGCCTGGAACTTCAACCTCAATGATTTGAAAAGTCAGGCTGCCCTCATTCAGGATGATGCAGTTCTGAATGTAACGGACTTGGAAGTAAATGAAAGACAAGAGGATGAAAAGGAATTTGGCTTACATGCAGAGAAGACATCAGTTGAAAAACTGGGCTGTTCCAACCCTACACCTAGCTGTGAGGATGTGTGTGATCTTCGTTATTTTGAGAGTTCATCTGCTTCGCTTCCTATTAAGCCTATTGGAGCGGTAAATAATGGCTTTGAAATTTACGAGGAAGATATGACTACAGCTGATCGAACAGAAGAAATAAACACAAATAACCCAAGAGTGATGGATCAAGAATATAGAAACAGTGATTATAAAGCAAATGGAGCAGCTGCTCAGCTAAAGGAGCACTCTAAAGTTTCCTCTGTTCTTGGGAAAAAGGTGTTTTGCAACAAATGTGCGGATCCTACAAGCAGCTTGTTTAATTCAGTTGGAAGTTTGACCAGTCCATTCCCCACAAACCTTTCAGCTTCCTCACTTCTCCCATCACTGCACTGCATTTTCCAGCAGAATGAGTTGCAGAGGGAAGAAATTATTAAGTCAATCAAGTATTTGGAACAAATCTCTGGCATGAAGAAAGAGTCAGCGGAGGTGAGTATGAGTGACTTTATGCAGTTACCAACACAGGCATCCTCTAGGGAGAGAGAATTATGGTCTCAAGTGATTCATCTGCATCAGAGATGTAGCATCATTATGCCCTCTGTCACTTTCAAGCTGGGATTTCAAAATATGGTCATTCTATTTGAGAAATCAAAATTTTCTGGACAGATGGTTATGCTCAGTCAAACGTCATCCTGA 2076 41.71 MRHLHRFRRLTTCQIDRQLIPCRFCSFDFDSDTFIAGVLDSWIIVALVVVQCEKTIGLQFDHQNSEDVTSCYFRVMGNAPEKRYPVNSKYYKLYEEVGEGVSATVYRALCVPLNEIVAIKVLDLDRCNNDLEGTRREVNTMTLINHTNVLRAHCSFTTGHNLWIVMPYMAGGSCLHIMKLAHPEGLEEPVIAILLREVLKALVYLHSHGHIHRDVKAGNILIDSNGAVKLADFGVSASIFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFRADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLHYERDKRFSKSFKEMVAACLVKDPKKRPEAEKLLKHPFFKQGQPNEYLVRTILHGLPSLEDRFKMLKAKEAELLGQNKTLYGDKEQLSQKEYIRGVSAWNFNLNDLKSQAALIQDDAVLNVTDLEVNERQEDEKEFGLHAEKTSVEKLGCSNPTPSCEDVCDLRYFESSSASLPIKPIGAVNNGFEIYEEDMTTADRTEEINTNNPRVMDQEYRNSDYKANGAAAQLKEHSKVSSVLGKKVFCNKCADPTSSLFNSVGSLTSPFPTNLSASSLLPSLHCIFQQNELQREEIIKSIKYLEQISGMKKESAEVSMSDFMQLPTQASSRERELWSQVIHLHQRCSIIMPSVTFKLGFQNMVILFEKSKFSGQMVMLSQTSS 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27204815 27235603 - Hsped.02g18170.1 Hepe02g1817 563318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1817 691 Gene3D Transferase(Phosphotransferase) domain 1 172 398 - -
Hepe02g1817 691 Gene3D Phosphorylase Kinase; domain 1 80 167 - -
Hepe02g1817 691 CDD STKc_OSR1_SPAK 91 352 - -
Hepe02g1817 691 FunFam serine/threonine-protein kinase BLUS1 isoform X1 172 405 - -
Hepe02g1817 691 ProSitePatterns Protein kinases ATP-binding region signature. 97 120 IPR017441 GO:0005524(InterPro)
Hepe02g1817 691 ProSiteProfiles Protein kinase domain profile. 91 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1817 691 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 82 651 IPR047173 GO:0043539(InterPro)
Hepe02g1817 691 SMART serkin_6 91 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1817 691 FunFam Serine/threonine-protein kinase BLUS1 80 168 - -
Hepe02g1817 691 SUPERFAMILY Protein kinase-like (PK-like) 90 377 IPR011009 -
Hepe02g1817 691 Pfam Protein kinase domain 91 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1817 Hepe-Chr2:27204815 Hepe07g0143 Hepe-Chr7:1310318 1.55e-33 dispersed
Hepe01g1400 Hepe-Chr1:79237830 Hepe02g1817 Hepe-Chr2:27204815 7.49e-60 transposed
Hepe02g1286 Hepe-Chr2:16084032 Hepe02g1817 Hepe-Chr2:27204815 2.13e-177 transposed
Hepe05g1625 Hepe-Chr5:66089647 Hepe02g1817 Hepe-Chr2:27204815 1.13e-109 transposed
Hepe06g0942 Hepe-Chr6:57015303 Hepe02g1817 Hepe-Chr2:27204815 1.35e-158 transposed
Hepe10g1802 Hepe-Chr10:54764390 Hepe02g1817 Hepe-Chr2:27204815 5.87e-54 transposed
Hepe02g1817 Hepe-Chr2:27204815 Hepe02g3102 Hepe-Chr2:80162758 6.21e-152 wgd
Hepe02g1817 Hepe-Chr2:27204815 Hepe02g2333 Hepe-Chr2:67726739 3.68e-29 wgd
Hepe02g1817 Hepe-Chr2:27204815 Hepe09g1602 Hepe-Chr9:46187710 1.58e-17 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72578 PF00069 Pkinase 1.40E-58 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1817 K08835 - rcu:8289799 676.396