Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1823 ATGTTTGTTTTATTTTCAGTATTTGGTTTCTTCAGGATGATGCTGAAGGAGAAAGCAGGGACTTTTAGCCTGGTTCTTGAAAGACCTTTCACACCTTTTCCGATTCAACAGCTTCTGCTTTCGAACGATTTAGATATTTTATTTAACAGAGGTCGAGTACCTATTGCTACTTGGAAGAAAGAAGTTTTGGCATCAAATTTACGAACATCTGATGCAAGCAGTGGGAATTCTGGCTTTGCGACCTTCTCCTCCAAGTTCTCAACATCACAAGGTTGGAAACTTCTTAACGATCAAAATGGAGATGTAAAGTCTCATACGCAGAGAAACATTCTCACACCTCAAATCAACCAACTTGTTGGTATATTTACTGAAGAGGAGCCTGGAGATGGAGAATGGGCTCATGGGAACTTCCCCCTAGATGAATATGTCAAGGCATTAGAACGGTCTAATGGGGAGCTATATTATGATCACTCCCGTGGTATGAGCTATAGTAAGATCACAGAGCAAATTTATGTGGGGTCATGTATACAGACTGAAGCAGACGTAGAGGCTTTGTCAAATAACGTGGGAGTCACGGCTGTACTGAATTTTCAAGGTTCAACTGAGGCAGAAAACTGGGGGATTAATTCCCAATTAATCAACGAATCATGCCAAAAATTCGATATTCTCATGATCAACTATCCTATCAGGGAAGGAGATTCTTATGATTTGAGGAAAAAACTACCATTTTGTGTGGGCCTACTTCTACGACTGTTAAAAAAGAACCATCGAGTTTTTGTAACTTGTACCACTGGTTTTGATCGATCTCCAGCTAGTGTGATTGCATATTTACACTGGATGACCGATACTTCTCTTCATGCAGCTTATAATTTTATCACCACCTTGCATTCCTGCAAACCGGACAGGCCTGCAATCGCTTGGGCTACCTGGGATCTCATAGCAATGGTGGAAAATGGAAGCCATGATGGACCTCCCACTCATGCCGTTACCTTCGTTTGGAATGGACAAGAGGGGGAGGAAGTAAATTTGGTTGGAGATTTTACTGGTAACTGGAAAGAACCTGTCAAGGCTAGTCACAAGGGTGGGCCAAGATATGAAGTAGAAATGAAACTTCCTCAGGGGAAGTATTACTATAAGTTCATCACAAATGATCATTGGAGGCACTCAACAAATTCACCTGCTGAAAGAGACGATAGTGGGAATGTCAACAATATAATTGTCATCGGCGACATTGCCAGTGTTAGGCCCAAAGTTCAACCGCAAATAAAAGATGCAAATATTGTGAAAGTAATTGAAAGGCCACTGACAGAAAATGAGCGGTTTATGTTGGCGAAAGCGGCTCGTTGTGTTGCATTTTCTGTATGTCCAATTAGACTAACTCCCAAGTAG 1389 41.47 MFVLFSVFGFFRMMLKEKAGTFSLVLERPFTPFPIQQLLLSNDLDILFNRGRVPIATWKKEVLASNLRTSDASSGNSGFATFSSKFSTSQGWKLLNDQNGDVKSHTQRNILTPQINQLVGIFTEEEPGDGEWAHGNFPLDEYVKALERSNGELYYDHSRGMSYSKITEQIYVGSCIQTEADVEALSNNVGVTAVLNFQGSTEAENWGINSQLINESCQKFDILMINYPIREGDSYDLRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRSPASVIAYLHWMTDTSLHAAYNFITTLHSCKPDRPAIAWATWDLIAMVENGSHDGPPTHAVTFVWNGQEGEEVNLVGDFTGNWKEPVKASHKGGPRYEVEMKLPQGKYYYKFITNDHWRHSTNSPAERDDSGNVNNIIVIGDIASVRPKVQPQIKDANIVKVIERPLTENERFMLAKAARCVAFSVCPIRLTPK 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27741199 27746600 + Hsped.02g18230.1 Hepe02g1823 563324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1823 462 Pfam Dual specificity phosphatase, catalytic domain 171 293 IPR000340 GO:0016311(InterPro)
Hepe02g1823 462 CDD E_set_AMPKbeta_like_N 329 408 - -
Hepe02g1823 462 Pfam Glycogen recognition site of AMP-activated protein kinase 329 409 IPR032640 -
Hepe02g1823 462 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 8 456 - GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0043036(PANTHER)
Hepe02g1823 462 Gene3D Immunoglobulins 316 412 IPR013783 -
Hepe02g1823 462 CDD DSP_laforin-like 161 307 IPR045204 GO:0019203(InterPro)
Hepe02g1823 462 ProSiteProfiles Dual specificity protein phosphatase domain profile. 162 318 IPR020422 GO:0006470(InterPro)
Hepe02g1823 462 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 154 297 IPR029021 -
Hepe02g1823 462 Gene3D Protein tyrosine phosphatase superfamily 155 425 IPR029021 -
Hepe02g1823 462 SUPERFAMILY E set domains 326 409 IPR014756 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1823 - - - 0.0