Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1834 ATGAAAGAAAAGAGTGAAAGTGGAGGTGCTTATGTTAGGGCAGATCAGATAGATCTGAAGAGCTTAGACGAGCAATTACAGAGACATTTGAGCAAAGCATGGACTATGGAGAAGAACAAGAAGAAGGAGGACGAGGAAGTCGGCGGCGGAGGAAGGCCGGCGATTACCAGGCAGGAATGGGAGATTGACCCTTCTAAACTCATCATCAAAACCGTTATAGCTCGTGGTACTTTTGGAACTGTTCATCGTGGAATTTATGATGGCCAAGATGTTGCTGTTAAACTTCTTGACTGGGGAGAAGAGGGTCATAGGTCGGAGGCGGAAATCGCTTCTCTTAGAGCAGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTTACAAAGTTTATAGGAGCAACAATAGGCTCCTCAGATCTACAAATACAAACAGAAAATGGCCAAATTGGCATGCCAAGCAATATTTGTTGTGTTGTTGTTGAATATTGTCCTGGAGGTGCTCTGAAATCTTACCTCATAAAGAACCGGAGGAAAAAGCTGGCGTTCAAAGTAGTCGTCCAGCTAGCATTAGACCTTGCAAGAGGGTTGAGCTATCTTCATTCACAGAAGATTGTTCATAGAGATGTCAAAACAGAAAATATGCTTCTGGACAAAACGAGGACAGTAAAAATTGCAGACTTTGGTGTTGCTCGTGTCGAGGCCTCAAATCCCAATGATATGACTGGCGAGACCGGAACCCTTGGTTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTGTGGGAAATATACTGCTGCGATATGCCGTATCCCGACCTTAGCTTCTCAGAAGTGACTTCAGCTGTCGTCCGACAGAATCTGAGGCCAGAGATTCCTAGGTGTTGCCCGAGCTCGCTTGCAAATGTAATGAAGCGATGTTGGGACGCTAACCCGGACAAGCGTCCAGAGATGGATGAGGCTGTAACCATGTTGGAAGCAATTGACACATCGAAGGGTGGAGGTATGATCCCCCTCGATCAGTCTCAAGGCTGTTTTTGCTTCCGCAGGTACCGGGGGCCTTGA 1113 46.0 MKEKSESGGAYVRADQIDLKSLDEQLQRHLSKAWTMEKNKKKEDEEVGGGGRPAITRQEWEIDPSKLIIKTVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATIGSSDLQIQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEAVTMLEAIDTSKGGGMIPLDQSQGCFCFRRYRGP 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28060911 28064452 + Hsped.02g18340.1 Hepe02g1834 563335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1834 370 Gene3D Transferase(Phosphotransferase) domain 1 167 357 - -
Hepe02g1834 370 ProSiteProfiles Protein kinase domain profile. 67 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1834 370 SMART serkin_6 67 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g1834 370 Pfam Protein tyrosine and serine/threonine kinase 69 340 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1834 370 FunFam Serine/threonine-protein kinase HT1 167 352 - -
Hepe02g1834 370 FunFam Kinase suppressor of Ras 1 56 151 - -
Hepe02g1834 370 MobiDBLite consensus disorder prediction 33 50 - -
Hepe02g1834 370 CDD STKc_MAP3K-like 73 341 - -
Hepe02g1834 370 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 46 342 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Hepe02g1834 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1834 370 PRINTS Tyrosine kinase catalytic domain signature 164 177 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1834 370 PRINTS Tyrosine kinase catalytic domain signature 202 220 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1834 370 PRINTS Tyrosine kinase catalytic domain signature 268 290 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1834 370 PRINTS Tyrosine kinase catalytic domain signature 312 334 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g1834 370 Gene3D Phosphorylase Kinase; domain 1 54 151 - -
Hepe02g1834 370 MobiDBLite consensus disorder prediction 33 54 - -
Hepe02g1834 370 SUPERFAMILY Protein kinase-like (PK-like) 52 341 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1834 Hepe-Chr2:28060911 Hepe05g1576 Hepe-Chr5:65319680 2.28e-186 dispersed
Hepe02g1834 Hepe-Chr2:28060911 Hepe07g2231 Hepe-Chr7:66746012 1.65e-46 wgd
Hepe02g1834 Hepe-Chr2:28060911 Hepe09g0193 Hepe-Chr9:1528848 3.61e-242 wgd
Hepe02g1834 Hepe-Chr2:28060911 Hepe09g1569 Hepe-Chr9:42598454 3.11e-44 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72579 PF07714 PK_Tyr_Ser-Thr 6.20E-64 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1834 - - - 0.0