Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1893 ATGGAGATTCTGAACTTTGTCTTCATTCTTCTCTCGACGGCGTCGTTTTTGTCCCTCTCGGAATCGGCTCCTCTCAGACCGGATTACTACCAGAAATCCTGCCCCAGATTCACCCAGATTATCCAAGAAACCATCACCAACAAGCAGATCACAAGCCCTTCCACCGCCGCCGGAACTCTCCGTCTCTTCCTCCACGACTGTCTTCCCAACGGCTGCGACGCCTCCGTCCTCATCTCCTCCACTCCCTTTAACAAAGCCGAGCGCGACGCCGACATCAACCTCTCTCTCCCCGGCGACTCCTTCGATGTAATCGTTAGGGCCAAGACCGCTCTCGAGCTCGCATGTCCCAACACAGTCTCCTGTGCTGACATTCTCGCCGTTTCCACTCGCGACCTCGTCACCATGGTCGGCGGACCTTACTACAACGTTCTCCTCGGTCGCAGAGATGGCCGTTCGTCCAAAGCTTCGACGATTCCCGGTGCTCTTCCGATGGCTACATCGCCGATGTCTCAGATTATTGATATTTTCAAAGCTCGCGGGTTTACTGTACAGGAAATGGTAGCCTTATCTGGTGCTCATACGATTGGATTCTCGCATTGTAAGGAATTTAGTTCTCAGATCTATAATTATAGCAAGTCTTCGTCGTTTGATACTCAGTATAACCCTAGATTCGCGCAAGGGTTGCAGAAGGCTTGTTCTGGTTTTGGAAAAAATCCTACATTATCGGTTTTTAATGACATTATGACTCCCAACAAGTTTGATAACACTTACTTCCAGAATCTGCCCAAGGGATTGGGGATCTTGAAGTCTGATCATGGATTGTATAACGATTGGAGGACGAGGCCGTTCGTGGAGGCGTATGCGGCGGATGAGAACAAGTTCTTCAAAGATTTTGCTCGGGCGATGGAGAAATTGAGTAATTATAAAGTTATAACTGGTAATCAAGGGGAGATTCGGCATAGGTGTGATGCGATTAATTGA 981 48.93 MEILNFVFILLSTASFLSLSESAPLRPDYYQKSCPRFTQIIQETITNKQITSPSTAAGTLRLFLHDCLPNGCDASVLISSTPFNKAERDADINLSLPGDSFDVIVRAKTALELACPNTVSCADILAVSTRDLVTMVGGPYYNVLLGRRDGRSSKASTIPGALPMATSPMSQIIDIFKARGFTVQEMVALSGAHTIGFSHCKEFSSQIYNYSKSSSFDTQYNPRFAQGLQKACSGFGKNPTLSVFNDIMTPNKFDNTYFQNLPKGLGILKSDHGLYNDWRTRPFVEAYAADENKFFKDFARAMEKLSNYKVITGNQGEIRHRCDAIN 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30550559 30552583 + Hsped.02g18930.1 Hepe02g1893 563394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1893 326 PANTHER - 9 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 Gene3D Peroxidase, domain 2 163 305 - -
Hepe02g1893 326 FunFam Peroxidase 163 305 - -
Hepe02g1893 326 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 CDD secretory_peroxidase 25 325 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe02g1893 326 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 Pfam Peroxidase 43 290 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 Gene3D - 28 326 - -
Hepe02g1893 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Hepe02g1893 326 FunFam Peroxidase 28 170 - -
Hepe02g1893 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g1893 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1893 Hepe-Chr2:30550559 Hepe07g2248 Hepe-Chr7:66877944 5.60e-136 dispersed
Hepe02g1893 Hepe-Chr2:30550559 Hepe02g3126 Hepe-Chr2:80450442 1.09e-169 wgd
Hepe02g1893 Hepe-Chr2:30550559 Hepe04g0050 Hepe-Chr4:21583532 2.90e-66 wgd
Hepe02g1893 Hepe-Chr2:30550559 Hepe07g1315 Hepe-Chr7:42080594 3.18e-44 wgd
Hepe02g1893 Hepe-Chr2:30550559 Hepe09g0171 Hepe-Chr9:1362611 5.82e-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1893 K00430 - csv:101219829 606.675