Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g1899 ATGCCACCCGCCGCCGGAGGAACAGAGGCTTTCCCCGATCTCGGCCGCCACTGCCAGCACTCCGATTGCCACCTCCTCGATTTCCTCCCTTTCACCTGCCACGCTTGCCAGAAGGTGTTCTGTTTGGATCATCGCGCTTTCAAATCCCATGACTGCCCTAATTCCGATCACAACAGCAGAAAAGTTGTGGTATGCGAAATCTGCTCCACGTCGATCGAGACCACCGGGAAGGACGGCCGCGACGAGACCATGATCTTGGATACCCATCACAAATCGGGAGATTGCGATCCCAGGAAGAAGAAGAAGCCGACTTGTGCGGCCAGGCGGTGCCGGGAAATTCTTACATTTTCGAATACTTGTGTGTGTAAAACTTGCCGGTTGAAGGTGTGTTTGAAGCACCGGTTTCCGGCGGAGCATGGTTGTGGACAGCCATCGTCTACGGCGGCGGCAGCAGCGGTTGATAAAGGGGGATGGAATGAGAAGTTTATGGCAGCTTTGGGATTGAGGAGCGGCGGGGATTGTGGGAAGAGGGAACGCCCGACGGCGGCCAAGGGTTCTTCTCCGACTGCCCCATCTGTTAAATCTTGTTGA 591 55.67 MPPAAGGTEAFPDLGRHCQHSDCHLLDFLPFTCHACQKVFCLDHRAFKSHDCPNSDHNSRKVVVCEICSTSIETTGKDGRDETMILDTHHKSGDCDPRKKKKPTCAARRCREILTFSNTCVCKTCRLKVCLKHRFPAEHGCGQPSSTAAAAAVDKGGWNEKFMAALGLRSGGDCGKRERPTAAKGSSPTAPSVKSC 196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31376669 31377378 + Hsped.02g18990.1 Hepe02g1899 563400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g1899 196 Pfam AN1-like Zinc finger 105 143 IPR000058 GO:0008270(InterPro)
Hepe02g1899 196 Pfam AN1-like Zinc finger 18 55 IPR000058 GO:0008270(InterPro)
Hepe02g1899 196 SUPERFAMILY AN1-like Zinc finger 65 152 IPR035896 -
Hepe02g1899 196 MobiDBLite consensus disorder prediction 169 196 - -
Hepe02g1899 196 ProSiteProfiles Zinc finger AN1-type profile. 99 149 IPR000058 GO:0008270(InterPro)
Hepe02g1899 196 Gene3D - 4 71 IPR035896 -
Hepe02g1899 196 Gene3D - 81 157 IPR035896 -
Hepe02g1899 196 ProSiteProfiles Zinc finger AN1-type profile. 12 60 IPR000058 GO:0008270(InterPro)
Hepe02g1899 196 SUPERFAMILY AN1-like Zinc finger 11 58 IPR035896 -
Hepe02g1899 196 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 10 171 - GO:0005737(PANTHER)
Hepe02g1899 196 SMART AN1_Zf_4 18 57 IPR000058 GO:0008270(InterPro)
Hepe02g1899 196 SMART AN1_Zf_4 105 146 IPR000058 GO:0008270(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g1899 - - - 0.0