Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g1946 | ATGGAGGCGCCAGCTTTGGTACTGAAGAACGAGGAGAATTTGAGAATATGTTGGACAGAAGGTCAAACTCAGGCCGTTAGACGTGTCAAGAGACGGCGGAGAGAGCCCGCCGCCGCCGCCACAGCCTCTGATCAAACTAATAAGAAGCAGTGTCTGCCGCAACAATCCGATCAAGCTCCAACCACCACTACGAAGCGGAGTTCAAGATTTCGCGGCGTAAGCAGCAGACATAGATGGACGGGTCGGTTCGAAGCGCATTTATGGGATAAGCTTTCTTGGAACATGACACAAAAGAAGAAGGGCAAACAAGGAGCTTATGATGAAGAAGAATCAGCTGCAAGAGCATATGATTTAGCAGCACTCAAGTACTGGGGTGTAACAACCATCACTAATTTTCCAATATCAGAGTATGAGAAAGAGATTGAGATAATGCAAGCAATGACAAAGGAGGAGTATTTGGCCTCTTTAAGAAGAAAAAGCAGTGGTTTCTCAAGAGGTGTTTCAAAATATAGAGGAGTTGCAAGGCACCATCACAATGGTAGATGGGAAGCAAGAATAGGAAGAGTTTATGGGAACAAGTACCTCTATCTTGGAACTTACAGCACTCAAGAGGAAGCTGCTCGAGCTTATGATATGGCTGCCATAGAATACCGAGGGATCAATGCAGTCACCAACTTCGACTGGAACAATTACATGGCGTGGCTGAAGCCTCCTCCACCGCCGCCCGCCGGCCCCAACGACGCCCATATGGCGTCGGACCCCCACAAAGAACTCTGCAACTCCAGCTCCATCCCAGCAGAAGAAACTTCCCTCTTCAAAAACCATCACTACGACATCCCGTTCCCTTCCCTTCAAAAGAAAGAGCTTCTTGAAAGCTGCAGCACCCCTCTAAACAGTTACGCTAAATCTTCTTCTCCATCAGCTCTCGACCTCCTTCTTCGATCTTCATTTTTCAAGAAACTGGTTGAGACAAACTCCAATCTCTCTGTGGATGAGGCTGATAATGGAGAAGAAGCAAAGACTCGAGCGCAGCTCGACAGTGTATTTGATGAGTTTGGAGACGTCTTCTGTGATAGACTTACAGATGTACCATTTGTTTGCAGCTCCAACAAAGAGCTGCAAGAAAGCGAGCTTCATTCCTACTTTAATGGCACATTTCATCGCTTCAAAGCAGCCTGA | 1179 | 47.07 | MEAPALVLKNEENLRICWTEGQTQAVRRVKRRRREPAAAATASDQTNKKQCLPQQSDQAPTTTTKRSSRFRGVSSRHRWTGRFEAHLWDKLSWNMTQKKKGKQGAYDEEESAARAYDLAALKYWGVTTITNFPISEYEKEIEIMQAMTKEEYLASLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVYGNKYLYLGTYSTQEEAARAYDMAAIEYRGINAVTNFDWNNYMAWLKPPPPPPAGPNDAHMASDPHKELCNSSSIPAEETSLFKNHHYDIPFPSLQKKELLESCSTPLNSYAKSSSPSALDLLLRSSFFKKLVETNSNLSVDEADNGEEAKTRAQLDSVFDEFGDVFCDRLTDVPFVCSSNKELQESELHSYFNGTFHRFKAA | 392 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33659694 | 33663804 | + | Hsped.02g19460.1 | Hepe02g1946 | 563447 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g1946 | 392 | CDD | AP2 | 68 | 135 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1946 | 392 | Pfam | AP2 domain | 168 | 219 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1946 | 392 | SUPERFAMILY | DNA-binding domain | 168 | 229 | IPR016177 | GO:0003677(InterPro) | |
Hepe02g1946 | 392 | MobiDBLite | consensus disorder prediction | 40 | 69 | - | - | |
Hepe02g1946 | 392 | ProSiteProfiles | AP2/ERF domain profile. | 169 | 227 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1946 | 392 | Gene3D | AP2/ERF domain | 68 | 135 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1946 | 392 | Gene3D | AP2/ERF domain | 168 | 228 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1946 | 392 | MobiDBLite | consensus disorder prediction | 27 | 74 | - | - | |
Hepe02g1946 | 392 | ProSiteProfiles | AP2/ERF domain profile. | 69 | 133 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1946 | 392 | SUPERFAMILY | DNA-binding domain | 68 | 135 | IPR016177 | GO:0003677(InterPro) | |
Hepe02g1946 | 392 | SMART | rav1_2 | 169 | 233 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1946 | 392 | SMART | rav1_2 | 69 | 139 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1946 | 392 | CDD | AP2 | 168 | 229 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe02g1946 | 392 | FunFam | AP2-like ethylene-responsive transcription factor | 168 | 229 | - | - | |
Hepe02g1946 | 392 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 54 | 260 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1946 | Hepe-Chr2:33659694 | Hepe08g1600 | Hepe-Chr8:23033301 | 3.66e-104 | dispersed | |
Hepe02g1946 | Hepe-Chr2:33659694 | Hepe05g0800 | Hepe-Chr5:19156197 | 9.59e-54 | wgd | |
Hepe02g1946 | Hepe-Chr2:33659694 | Hepe06g0015 | Hepe-Chr6:466507 | 3.57e-06 | wgd | |
Hepe02g1946 | Hepe-Chr2:33659694 | Hepe07g1219 | Hepe-Chr7:30453231 | 9.39e-07 | wgd | |
Hepe02g1946 | Hepe-Chr2:33659694 | Hepe08g1924 | Hepe-Chr8:51016520 | 1.79e-74 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55067 | PF00847 | AP2 | 1.00E-07 | CL0081 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g1946 | - | - | - | 0.0 |