Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe02g2068 | ATGGATGAGAGTTCAGGATCAAACAATGGAAACCACAGTGTTTCTTTGAATATCAAAGATGATTCTACAGCGGATTGTGTCCCTGTACTTTTCCTTCAGAAGTTGATTGCAGAGGTGATGGGGACATATTTCTTGATATTTGCCGGGGAAGCTTCAGTAGTGGTGAATTTGAACAAAGATGGAGTCATCACTTTTCCAGGGATTTCAATTGTTTGGGGTTTGGTTGTAATGGTGATGATCTATTCTGTTGGCCATATATCTGGTGCTCATTTTAACCCTTCTGTCACCATAGCCTTTGCCATTACCAGGAGATTTCCATGGAAAGAGGTGCCAGCATATTTCGTAGCTCAAGTTATTGGATCAACATTAGCAAGTGGGACACTTAGGCTAATATTTAATGGAACACAAGACCACTTTCCAGGAACTCTCCCAAGTGACTCATATCTGCAGACCTTTGTGATTGAATTCATAATCACATTTTACCTCATGTTTGTGGTATCTGGTGTTGCCACTGACAATAGAGCCACTGGTGAGCTTGCTGGACTCGCCGTGGGAGCTACTGTACTTCTCAATGTGATGATTGCAGGGCCAATTACAGGAGCATCCATGAATCCAGCCAGAAGCTTGGGACCTGCTATAGTATTTAATCAGTTCAAAGGGTTATGGATCTACATGACAGCACCTATTCTAGGAGCAACTGCAGCTTGCTTTCTTCCTCCATCAATCATGGATGAGAGTTCAGAATCAAACAATGGAAACCACAGTGTTTCTTTGAATATCAAAGATGATTCTACAGCGGATTGTGTCCCTGTACTTTTCCTTCAAAAGTTGATTGCAGAGGTGATGGGGACATATTTCTTGATATTTGCCGGGGAAGCTTCAGTAGTGGTGAATTTGAACAAAGATGGAGTCATCACTTTTCCAGGGATTTCAATTGTTTGGGGTTTGGTTGTAATGGTGATGATCTATTCTGTTGGCCATATATCTGGTGCTCATTTTAACCCTTCTGTCACCATAGCCTTTGCCATTACTAGGAGATTTCCATGGAAAGAGGTGCCAGCATATTTGGTAGCTCAAGTTATTGGATCAACATTAGCAAGTGGGACACTTAGGCTAATATTTAATGGAACACAAGACCACTTTCCAGGAACTCTCCCAAGTGACTCATATCTGCAGACCTTTGTGATTGAATTCATAATCACATTTTACCTCATGTTTGTGGTATCTGGTGTTGCCACTGACAATAGAGCTACTGGTGAGCTTGCTGGACTCGCCGTGGGAGCTACTGTACTTCTCAATGTGATGATTGCAGGGCCAATTACAGGAGCATCCATGAATCCAGCCAGAAGCTTGGGACCTGCTATAGTATTTAATCAGTTCAAAGGGTTATGGATCTACATGACAGCACCTATTCTAGGAGCAACTGCAGGTGCGTTAGTGTATAATACCATCAGGTTCACAGACAAACCTCTACGAGAGATCACGAAAAGCGCCTCGTTCCTCAAAAGTCGTCAAGGCACCCCATGA | 1527 | 42.76 | MDESSGSNNGNHSVSLNIKDDSTADCVPVLFLQKLIAEVMGTYFLIFAGEASVVVNLNKDGVITFPGISIVWGLVVMVMIYSVGHISGAHFNPSVTIAFAITRRFPWKEVPAYFVAQVIGSTLASGTLRLIFNGTQDHFPGTLPSDSYLQTFVIEFIITFYLMFVVSGVATDNRATGELAGLAVGATVLLNVMIAGPITGASMNPARSLGPAIVFNQFKGLWIYMTAPILGATAACFLPPSIMDESSESNNGNHSVSLNIKDDSTADCVPVLFLQKLIAEVMGTYFLIFAGEASVVVNLNKDGVITFPGISIVWGLVVMVMIYSVGHISGAHFNPSVTIAFAITRRFPWKEVPAYLVAQVIGSTLASGTLRLIFNGTQDHFPGTLPSDSYLQTFVIEFIITFYLMFVVSGVATDNRATGELAGLAVGATVLLNVMIAGPITGASMNPARSLGPAIVFNQFKGLWIYMTAPILGATAGALVYNTIRFTDKPLREITKSASFLKSRQGTP | 508 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 50703899 | 50708845 | - | Hsped.02g20680.1 | Hepe02g2068 | 563569 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe02g2068 | 508 | CDD | MIP | 275 | 484 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe02g2068 | 508 | ProSitePatterns | MIP family signature. | 90 | 98 | IPR022357 | - | |
| Hepe02g2068 | 508 | PANTHER | AQUAPORIN NIP2-1 | 257 | 489 | IPR034294 | - | |
| Hepe02g2068 | 508 | NCBIfam | MIP family channel protein | 37 | 237 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe02g2068 | 508 | NCBIfam | MIP family channel protein | 279 | 481 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe02g2068 | 508 | SUPERFAMILY | Aquaporin-like | 29 | 240 | IPR023271 | - | |
| Hepe02g2068 | 508 | PRINTS | Major intrinsic protein family signature | 351 | 370 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe02g2068 | 508 | PRINTS | Major intrinsic protein family signature | 427 | 449 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe02g2068 | 508 | PRINTS | Major intrinsic protein family signature | 464 | 484 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe02g2068 | 508 | PRINTS | Major intrinsic protein family signature | 396 | 414 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe02g2068 | 508 | PRINTS | Major intrinsic protein family signature | 314 | 338 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe02g2068 | 508 | PRINTS | Major intrinsic protein family signature | 275 | 294 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe02g2068 | 508 | ProSitePatterns | MIP family signature. | 332 | 340 | IPR022357 | - | |
| Hepe02g2068 | 508 | Pfam | Major intrinsic protein | 272 | 481 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe02g2068 | 508 | Pfam | Major intrinsic protein | 30 | 237 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe02g2068 | 508 | SUPERFAMILY | Aquaporin-like | 271 | 495 | IPR023271 | - | |
| Hepe02g2068 | 508 | CDD | MIP | 33 | 238 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe02g2068 | 508 | Gene3D | Glycerol uptake facilitator protein. | 259 | 496 | IPR023271 | - | |
| Hepe02g2068 | 508 | Gene3D | Glycerol uptake facilitator protein. | 17 | 254 | IPR023271 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g2068 | Hepe-Chr2:50703899 | Hepe06g0442 | Hepe-Chr6:23783290 | 3.35e-175 | dispersed | |
| Hepe02g2066 | Hepe-Chr2:50699984 | Hepe02g2068 | Hepe-Chr2:50703899 | 9.53e-56 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe02g2068 | K09874 | - | csv:101219297 | 419.853 |