Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2078 ATGGGGATTAAAAATTCAAAGCCGAGTCAGGGGAAGGTGGAACAACTTAGTCTGCAACACCACCTCATCAATTATCTATCCAAAAGCTTTTACATCCGTAACTTGGTATCCAAGCAAAGGAGGCGCATGCTTGTTGCTGGCTTTGATCTTGACATGTCATACATCACAGATCATGTACTTGCAATGTCATTCCCTGCCGAGCGTATGCGTGCCGTATATCGTAATCCCTTATGGCAGGTTAAGTCCGTATTGGACATGAGGCATCAAGGACATTACAAGATCTATAATCTCTGTATTGAAGAATCATATGATCCATCACATTTTCATGGCCGCGTGGAGTCGTTTCCTTTCGATGATAATCATGTTCCACCTCTACAGATGATCAATCTTTTCTGTGAAAATGTCTCTTCATGGCTATCCTCCCATCCAAAGAATATTGCGGTTGTACATTGCATGGCTGGAAAAGGTCGGACGGGATTGATGGTATGTGCCTACTTAGTTTACTGTGGCATGTCAGTGGAGGATGCACTTCAGCTGTATGCTCAGAGGCGAACCACCAATAATGAAGGAGTATCAATTCCAAGCCAACGACGGTACGTGGGCTACTGGTCAAAGTGCCTTTCTTTTCCCAAAGGAGTTTATAATGGAGCTCCTGAGGTAAACTTGCCCGGACCGTGTAAGAGAGAGTTGCAGAGAATTCGTCTTTATGACACAGTTAACACTGAATCAATTTTCTTTGTGGTCTCAGAATTGCAGGAGGTTCCTTCTCAACTATACCGTCCATCTATGGAACTTACCAGGAATTGTTGCAGACAATTTAAGAGAGGTTATGAAAGAAGTGACAGTCCTCGTTATTTTCTATCTTTTGTTGAAGGCGAAGGCGAAGGCGAAGGCGAAAACGAAAACGAAGAGAACGAGCCAGAACCAGAACCCCATCTTATTGTTCAAATGGATACTGAGTGTTCAGCACTATACAACAAAACCTGCCTTGACTACAATTTTGAGAAGCCTCTACCACTAACTGGAGATGTGCGCATCATATTCTACGCAAAGATGTTTGGAGGGCGTCTCTTCTATGCTTGCTTCAACACAGCTTTCATTAAAAACAGCTTGCTACAGCTAAGGTTGCAGGATTTGGACAAAGTTGGGAAAAGGGGAAGGTCAATTTGTGGTCCTTCCTTCTGCTTGGAGTTGGTATTTGGTCCTGCCAATGCAAAACACTCATTTTCGACTTCATCGAACAACGAAGATCCTAGTGATGATTCGTCTTAA 1272 43.32 MGIKNSKPSQGKVEQLSLQHHLINYLSKSFYIRNLVSKQRRRMLVAGFDLDMSYITDHVLAMSFPAERMRAVYRNPLWQVKSVLDMRHQGHYKIYNLCIEESYDPSHFHGRVESFPFDDNHVPPLQMINLFCENVSSWLSSHPKNIAVVHCMAGKGRTGLMVCAYLVYCGMSVEDALQLYAQRRTTNNEGVSIPSQRRYVGYWSKCLSFPKGVYNGAPEVNLPGPCKRELQRIRLYDTVNTESIFFVVSELQEVPSQLYRPSMELTRNCCRQFKRGYERSDSPRYFLSFVEGEGEGEGENENEENEPEPEPHLIVQMDTECSALYNKTCLDYNFEKPLPLTGDVRIIFYAKMFGGRLFYACFNTAFIKNSLLQLRLQDLDKVGKRGRSICGPSFCLELVFGPANAKHSFSTSSNNEDPSDDSS 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 51911721 51914338 + Hsped.02g20780.1 Hepe02g2078 563579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2078 423 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN 28 210 - -
Hepe02g2078 423 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 312 402 IPR035892 -
Hepe02g2078 423 Gene3D Protein tyrosine phosphatase superfamily 28 209 IPR029021 -
Hepe02g2078 423 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 125 184 IPR000387 GO:0016311(InterPro)
Hepe02g2078 423 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311(InterPro)
Hepe02g2078 423 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 48 207 IPR029021 -
Hepe02g2078 423 ProSiteProfiles C2 tensin-type domain profile. 241 403 IPR014020 -
Hepe02g2078 423 Pfam Polymorphic toxin system, DSP-PTPase phosphatase 113 170 - -
Hepe02g2078 423 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 30 412 IPR051281 GO:0004725(PANTHER)|GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER)|GO:0046856(PANTHER)
Hepe02g2078 423 SMART PTEN_C2_2 223 402 IPR014020 -
Hepe02g2078 423 ProSiteProfiles Phosphatase tensin-type domain profile. 41 210 IPR029023 -
Hepe02g2078 423 Pfam C2 domain of PTEN tumour-suppressor protein 322 401 IPR014020 -
Hepe02g2078 423 CDD PTP_PTEN 51 205 IPR045101 GO:0016791(InterPro)
Hepe02g2078 423 Gene3D - 303 405 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2078 Hepe-Chr2:51911721 Hepe04g1268 Hepe-Chr4:68209864 3.05e-43 dispersed
Hepe02g2078 Hepe-Chr2:51911721 Hepe02g0602 Hepe-Chr2:6253950 1.14e-45 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2078 K01110 - csv:101212127 755.747