Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2080 ATGGCGACCTCAAAACCCCAAAGGTCTCCTGAAGAGGTCGAAGACATTATCCTTCGCAAAGTCTTCCTCATCTCTCTCACCGATTCTTCCGATTCCCGAATCGTCTATCTCGAGCAAACCGCCGCCGAACTCCTCAGCGAGAGCAAGCAATTGAGGATTTCAAGAGATGTAATGGAGCGCATCATAATCGATCGCCTATCGGGCAATTTCCCCTCCTCCGCCGCCGAACCCCCTTTTCAGTACCTAATCGGCTGCTACCGTCGAGCCCACGACGAGACTAAGAAAATCTCTTCCATGAAGGATAGGAATTTGCGGTCTGAGATTGAAATTTCTCTCAAGCAAGTGAAGAAGTTGGCGGTTTCTTATTCTAGGATTCATTTGGGGAATCCTGAATTGTTTTCTGCTGGGGATTTGGCTACTAAGTCCAACACTTCCCCTTTGCTTCCTTTGGTTTTCTCTGAGGTTGGGGGCTCCGTTGATGGATTTGGGGCTACTACTAGTACTAATGTTGCTGGAGGCCTTCACTGCCCTCCTGGTTTCTTGGATGAGTTTCTCCTGGATTCTGATTTTGATACATTAGACCCCATTTTGAAGGGTTTGTATGAGGATTTAAGGGGTACCGTCCTTAAAGTTTCTGCTCTTGGGAACTTCCAGCACCCCTTAAGGGCACTTAGGTTTCTGGTCAGTTTTCCTGTTGGGGCTAAATCTCTTGTGAATCATCCATGGTGGATTCCCACTGGTAAATATTCCAATGGGCGTGTCATTGAAATGACAAGCATTTTGGGGCCTTTCTTCCACGTCAGTGCTCTGCCTGACCATGCCATTTTTAAGAGCCAACCTGATGTTGGCCAGCAGTGCTTTTCAGAAGCATCAACTCGTAGACCATCTGATTTACTGTCTTCATTCACTACAATTAAAACAGTCATGAATAACTTATATGATGGCCTTGCGGAAGTGCTTCTGTCTCTTCTTAAGAACACAGAGACCCGTGAAAATGTTCTTGAGTATCTTGCAGAGGTGATAAATCGAAACTCATCAAGGGCTCATATACAGGTTGATCCTCTCTCCTGTGCAAGTTCAGGCATGTTTGTTAATCTCAGTTCCATCATGCTACGTCTCTGTGAGCCATTTCTAGATGCAAACTTGACCAAAAGGGATAAGATTGATCCAAAATATGTATGTTATGGTAACCGCTTGGAGTTAAGAGGATTAACTGCTCTACATGCGTCGTCGGAAGAAGTTACCGAGTGGATTAATAATGGTACTCAGTTGAAAACTGATAACTCCGGGCAGTTTAGCGACAGTGAAAGTCGCTTGCTACAATCCCAAGAAGCTTCCAGTTCTGGCAGTAATGCTACTACTGGATCTTCTAGTGCAAAGGCAAGATCGAGTAGTGATAAAACTAGGTACCCTTTCATATGTGAGTGCTTCTTTATGACTGCAAGGGTGCTGAATTTGGGCTTGTTAAAAGCATTTTCAGACTTCAAGCATTTGGTACAGGATATATCTAGGTGTGAAGATACATTGTCCACGCTCAAAGCCATGCAGGGACAAGGGCCTGCTCCACAGCTGGAAATGGATATAGCTCGTCTTGAGAAGGAAATAGAGTTGTATTCACAGGAAAAGCTTTGTTATGAAGCTCAAATACTGAGGGATGGGACACTAATCCAGCAAGCTCTTATTTTCTGTCGATTAATGATCGTTTGGTTAGTTGGTTTGGTTGGTGGATTTAAAATGCCTCTTCCATCAACTTGCCCGATGGAATTTTCATCCATGCCAGAACATTTTGTGGAAGATGCAATGGAATTGCTTATATTTGCTTCCCGGATTCCAAAAGCCTTGGATGGTATCAATTTGGATGATTTTATGAACTTCATTATTATGTTTATGGCAAGTCCAGAATATATCAGAAATCCTTACTTAAGAGCAAAGATGGTTGAAGTTCTGAACTGCTGGATTCCTCGTAGAAGTGGTTCATCTGTAACAGCAACATTATTTGAAGGCCACCAACTATCACTCGAGTATCTTGTTAGGAATTTATTAAAGCTCTATGTGGACATTGAGTTCACTGGTTCACATACACAGTTTTATGACAAGTTCAACATCCGTCATAATATTGCTGAACTTCTCGAATACCTTTGGCAGGTTCCTAGTCATCGCAACGCTTGGAGAATGATTGCCAAGGAAGAGGAGAAGGGTGTTTACCTGAATTTCTTGAACTTCCTAATCAATGATAGCATTTATCTTCTTGATGAAAGCCTTAATAAGATTCTCGAACTTAAAGAGCTTGAAGCCGAAATGTCAAATACCGCAGAATGGGAGCGGCGACCTGCTCAAGAGAGGCAGGAGAGAACTCGGCTGTTTCACTCCCAAGAAAATATCATCCGAATTGATATGAAATTAGCAAATGAGGATGTGAGTTTGCTGGCATTTACGTCGGAGCAAATTACGGCTCCTTTCCTACTTTCAGAGATGGTCGAAAGAGTGGCCAGCATGCTTAATTATTTTCTCCTGCAACTTGTTGGTCCTCAGCGAAGATCTCTTAGTCTGAAAGACCCGGAAAAATATGAATTCCGTCCAAAAGAGTTGCTTAAGCAGATTGTTCACATATATGTTCATCTGGCAAGAGGCGATACAGAGAATATTTTCCCAGCTGCCATTTCAGAGGACGGCCGATCGTACAACGAGCAGTTTTTTCCAAGAAATGTATATCATTGTGGATATACTGGTTTGCATCTTTTCTCTGCCTGA 2751 43.04 MATSKPQRSPEEVEDIILRKVFLISLTDSSDSRIVYLEQTAAELLSESKQLRISRDVMERIIIDRLSGNFPSSAAEPPFQYLIGCYRRAHDETKKISSMKDRNLRSEIEISLKQVKKLAVSYSRIHLGNPELFSAGDLATKSNTSPLLPLVFSEVGGSVDGFGATTSTNVAGGLHCPPGFLDEFLLDSDFDTLDPILKGLYEDLRGTVLKVSALGNFQHPLRALRFLVSFPVGAKSLVNHPWWIPTGKYSNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPSDLLSSFTTIKTVMNNLYDGLAEVLLSLLKNTETRENVLEYLAEVINRNSSRAHIQVDPLSCASSGMFVNLSSIMLRLCEPFLDANLTKRDKIDPKYVCYGNRLELRGLTALHASSEEVTEWINNGTQLKTDNSGQFSDSESRLLQSQEASSSGSNATTGSSSAKARSSSDKTRYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDTLSTLKAMQGQGPAPQLEMDIARLEKEIELYSQEKLCYEAQILRDGTLIQQALIFCRLMIVWLVGLVGGFKMPLPSTCPMEFSSMPEHFVEDAMELLIFASRIPKALDGINLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWIPRRSGSSVTATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRMIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSLLAFTSEQITAPFLLSEMVERVASMLNYFLLQLVGPQRRSLSLKDPEKYEFRPKELLKQIVHIYVHLARGDTENIFPAAISEDGRSYNEQFFPRNVYHCGYTGLHLFSA 916
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 52110282 52118638 - Hsped.02g20800.1 Hepe02g2080 563581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2080 916 Pfam Ubiquitin elongating factor core 261 905 IPR019474 GO:0000151(InterPro)|GO:0006511(InterPro)|GO:0016567(InterPro)|GO:0034450(InterPro)
Hepe02g2080 916 Coils Coil 521 548 - -
Hepe02g2080 916 PANTHER UBIQUITINATION FACTOR E4 8 911 IPR045132 GO:0000151(InterPro)|GO:0000209(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0030433(PANTHER)|GO:0034450(PANTHER)|GO:0034450(InterPro)|GO:0036503(InterPro)
Hepe02g2080 916 MobiDBLite consensus disorder prediction 425 463 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2080 Hepe-Chr2:52110282 Hepe05g1025 Hepe-Chr5:48516969 1.01e-35 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2080 K10597 - csv:101211398 1630.54