Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2107 ATGGAGTTTCTAAGTAGGATCGGCGCCTCTGGGCTGCTGCAGGCGGCGGTTTCCATGGCGGTGCTACTGCTCGTGGCGGTGCCGGAAGTTTCGGCGACACGGTGGACTGTTGGTAGCAACATGGGCTGGACGACCAATTTCAACTACACTACTTGGGCTCAGGGGAAGCACTTCTATTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGAGTATGAGAATTGTATTTCTGATCATCCACTCCACAATTACACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATGTGACCAGGCCTTACTACTTCATAAGTGGCAAAGGCTTTTGCTATGGAGGCATGAAGATCGCTATTAACGTCGAACACCTACCTCCCCCGCCCTCCGGCTCGCCCTTGAACGACAAGAACACTGCTCCCAGATCTAGCCACATTGCCCACACCCCATTTGTTTTAACCACTGTTTTTGCCATTGCCGCTTTCGCTCGGGTCTGGTAG 528 50.76 MEFLSRIGASGLLQAAVSMAVLLLVAVPEVSATRWTVGSNMGWTTNFNYTTWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTEYENCISDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKIAINVEHLPPPPSGSPLNDKNTAPRSSHIAHTPFVLTTVFAIAAFARVW 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 55042364 55044090 + Hsped.02g21070.1 Hepe02g2107 563608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2107 175 Gene3D - 31 134 IPR008972 -
Hepe02g2107 175 ProSiteProfiles Phytocyanin domain profile. 33 133 IPR003245 GO:0009055(InterPro)
Hepe02g2107 175 FunFam Lamin-like protein 31 134 - -
Hepe02g2107 175 SUPERFAMILY Cupredoxins 32 131 IPR008972 -
Hepe02g2107 175 PANTHER BLUE COPPER PROTEIN 20 137 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Hepe02g2107 175 Pfam Plastocyanin-like domain 43 125 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2107 Hepe-Chr2:55042364 Hepe09g1038 Hepe-Chr9:10789431 7.01e-34 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2107 - - - 0.0