Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2146 ATGAACCTGGGCATTGTTCTTTTCTGGATCATACAGATCTTGATTCTTGCCATTGGAGTTGTTTCTAAAACCAAAGCACCAGATGTATCTGCACTGAATGTGATGTACAGTAGTTTAAATTCACCATCACAACTATCTGGTTGGTCGAAAAGTGGGGGTGACCCATGTGGCGACTCTTGGGAAGGGATCCAATGCTCAGGATCATCCGTCACCGAAATTGATTTGAGCAAGAACAACCTCAATGGCGATATCCCCTATCAGCTTCCTCCTAATGCAGTTCACATTGATCTTTCTGAAAATAGCTTCACTGGTAGTGTGCCTTATTCAATTTCTCAGATGCCTGATCTTCAATTTTTAAATCTTGCTCATAACCAGCTGACTAACCAATTGAGTGACATGTTTGGCAAGCTTTCTAAACTCAAAAGCATGCACATACAAGAAAATAAATTTTCAGGTTCAATTAATGTTCTTGCTAACCTCCCACTTGATGATTTAACGGTAGGAAATTCATGGTCGAGTGGACCAGCTCCACCTCCACCACCAGGCACAGTGTCTCCGAAGGGCAAAAACTCGAACGAAAAGGAATCGAAAGGCGGGTTCTTCTCGGGGATGAATGGGATGATCATAGCAGGAATAGTGATGGGAGTTCTAGGTTTGATCGCGGTTATAATTGCATTGGCGTCGAGAAGATCTCCTCCATCACATTACCTAGACGAAGACCCAAGCCAATCCCACAACAACCACAAGGACGACATTGAGAGAAAATCATTCAATTCAGATACTTCTATTGACATAAAGAGCCTTCAGAAATCTTCTAGTGGGCTTATAAGACCTCCTCCGCCTCATGATCGTGTGCAGTCATTCAGTGATAATCAGTTTGCCACTCGTCTTAACTCCGGAAGAAGCACTTCCTTTCGCGCCGTTGGTTTCTCCTTGGCTGATTTGCAAACTGCTACTTCCAACTTTGTTTCTGCTCGCCTAATTGGTACCGGCACTATTGGACGTGTTTACAAGGCTAAGTATGGAGATGGCAAGGTTTTAGCAGTGAAGAAGATAGATTCATCAGTTTTTCAAGGAAGGAGAACAGAAGAATTTTCTGAAGTAGTTGCAATAATCTCAAGGCTTCACCACACAAACATTACAGAAGTTGTTGGATTTTGTTCAGAACAAGGACAGCACATGCTGGTTTATGAATTTTTCACCAATGGTTCACTTCATGAGTTTCTTCATATGTCAGATGACTTCAGTAAACCACTCACATGGAACACTAGAGTCAGAATCGCTTTGGGGACAGCAAGAGCTCTTGAGTACCTTCACGAAGTTTGCTCACCATCCATAATTCACATGAATATTAAGTCCTCTAATATATTACTTGATGCGGAACTTAATCCTCGACTCTCAGACTATGGTTTGGCAACTTTTTATAAGAATAGAAGTGAAAACCCTGGAGCTGGATATGATGCTCCAGAATGCATAAAGGGTTCAACTTATACAATGAAGAGTGACATTTACAGTTTGGGAGTGGTGATGTTGGAATTGTTGACAGGGCGGATGCCTTACAATGCAACAAAGCCAAAGGTGGAACAAAGTCTAGTCCGATGGGCAAGCCCACAGCTGCATGACATTGATGCATTGGACAAAATGGTGGATCCAGCATTGAGAGGGTTATATCCACCAAAGTCAGTTTCTAGATTTGCAGATATCATTGCCCTTTGTGTTCAATCAGAGCCTGAATTTAGGCCTCCCATGTCCGAGGTGGTGCAAGCATTGGTAACTTTGGTTCAACGATCCAGTATGAATGTCAGAGATGATCTTGGAAACTCTCGAAGAATGGATGATTATGACTATTAA 1851 42.3 MNLGIVLFWIIQILILAIGVVSKTKAPDVSALNVMYSSLNSPSQLSGWSKSGGDPCGDSWEGIQCSGSSVTEIDLSKNNLNGDIPYQLPPNAVHIDLSENSFTGSVPYSISQMPDLQFLNLAHNQLTNQLSDMFGKLSKLKSMHIQENKFSGSINVLANLPLDDLTVGNSWSSGPAPPPPPGTVSPKGKNSNEKESKGGFFSGMNGMIIAGIVMGVLGLIAVIIALASRRSPPSHYLDEDPSQSHNNHKDDIERKSFNSDTSIDIKSLQKSSSGLIRPPPPHDRVQSFSDNQFATRLNSGRSTSFRAVGFSLADLQTATSNFVSARLIGTGTIGRVYKAKYGDGKVLAVKKIDSSVFQGRRTEEFSEVVAIISRLHHTNITEVVGFCSEQGQHMLVYEFFTNGSLHEFLHMSDDFSKPLTWNTRVRIALGTARALEYLHEVCSPSIIHMNIKSSNILLDAELNPRLSDYGLATFYKNRSENPGAGYDAPECIKGSTYTMKSDIYSLGVVMLELLTGRMPYNATKPKVEQSLVRWASPQLHDIDALDKMVDPALRGLYPPKSVSRFADIIALCVQSEPEFRPPMSEVVQALVTLVQRSSMNVRDDLGNSRRMDDYDY 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 57961275 57971977 - Hsped.02g21460.1 Hepe02g2146 563647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2146 616 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 288 399 - -
Hepe02g2146 616 SUPERFAMILY Protein kinase-like (PK-like) 303 590 IPR011009 -
Hepe02g2146 616 PANTHER LEUCINE RICH REPEAT KINASE 2 24 177 IPR051420 -
Hepe02g2146 616 SUPERFAMILY L domain-like 26 161 - -
Hepe02g2146 616 Gene3D Transferase(Phosphotransferase) domain 1 400 613 - -
Hepe02g2146 616 Gene3D Phosphorylase Kinase; domain 1 285 399 - -
Hepe02g2146 616 Pfam Leucine rich repeat 69 126 IPR001611 GO:0005515(InterPro)
Hepe02g2146 616 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Hepe02g2146 616 Pfam Protein kinase domain 324 588 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2146 616 MobiDBLite consensus disorder prediction 233 259 - -
Hepe02g2146 616 ProSiteProfiles Protein kinase domain profile. 322 593 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2146 616 FunFam Leucine-rich repeat receptor-like kinase 27 133 - -
Hepe02g2146 616 Gene3D Ribonuclease Inhibitor 25 181 IPR032675 -
Hepe02g2146 616 MobiDBLite consensus disorder prediction 169 198 - -
Hepe02g2146 616 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 400 604 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2146 Hepe-Chr2:57961275 Hepe03g1378 Hepe-Chr3:70423070 4.86e-150 dispersed
Hepe02g2146 Hepe-Chr2:57961275 Hepe08g1507 Hepe-Chr8:18875861 3.62e-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72581 PF00069 Pkinase 1.50E-43 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2146 - - - 0.0