Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2147 ATGTCGTCACTGCACTGTCTGCACCGTGAGGGTCACGACATACTCTCTTCTAGTATGATCGAGCACCTACAGCTATACCTTCCTCCGCTCCGAGTTTTTCTTCTCGCTCGAGTCTTCGATGCCTTAGCTCCTCCTTTCGCTCCATCTGGTTCCTCGTTCGCTCTCTCTCAACCGATTGGCCCTGAGGAGCATTCACTGCATTTGGATTGGCCAATAAGAATGAAGATATGTTTAGGAATAGCAAAGGGGTTGTCTTACCTTCATGAAGAATCTAGATTGAAAATTGTTCACAGAGATATTAAAGCTACTAATGTTCTACTTGATGGAAGCTTGAATGCCAAGATCTCCGACTTTGGGTTGGCTAAGCTTGATGAAGAGGAGAACACCCATATCAGCACAAGAATTGCAGGCACAATAGGTTATATGGCTCCTGAGTACGCAACGAGGGGTTATTTGACTGATAAAGTTGATGTTTATAGCTTTGGAATTGTGGCCTTAGAAATTGTTAGTGGAAAAAGTAACACAAGTTACAGACCAAAAGAAGAGTATGTTTACCTTCTTGATTGGGCTATTGTTCTACAAGAAGAAGGAAACTTACTCAAACTTGTTGATCCGAGTCTTGGGTTAGATTACTCAAAAGAAGAAGCCATGAGGATGATTCGTGTTGCTCTCGTATGCACGAACCAATCTTCGACTCTCAGACCATTTATGTCTTCCGTGGATGTCAATTACAAGGGTGGCGATGGCGACGACGACTAA 759 43.35 MSSLHCLHREGHDILSSSMIEHLQLYLPPLRVFLLARVFDALAPPFAPSGSSFALSQPIGPEEHSLHLDWPIRMKICLGIAKGLSYLHEESRLKIVHRDIKATNVLLDGSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYATRGYLTDKVDVYSFGIVALEIVSGKSNTSYRPKEEYVYLLDWAIVLQEEGNLLKLVDPSLGLDYSKEEAMRMIRVALVCTNQSSTLRPFMSSVDVNYKGGDGDDD 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 58113966 58120061 + Hsped.02g21470.1 Hepe02g2147 563648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2147 252 SMART serkin_6 4 237 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2147 252 Gene3D Transferase(Phosphotransferase) domain 1 55 246 - -
Hepe02g2147 252 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 67 240 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Hepe02g2147 252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 95 107 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g2147 252 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2147 252 FunFam Putative LRR receptor-like serine/threonine-protein kinase 52 247 - -
Hepe02g2147 252 SUPERFAMILY Protein kinase-like (PK-like) 65 240 IPR011009 -
Hepe02g2147 252 Pfam Protein kinase domain 75 176 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2147 Hepe-Chr2:58113966 Hepe07g0962 Hepe-Chr7:12912952 4.87e-96 dispersed
Hepe01g0186 Hepe-Chr1:30458396 Hepe02g2147 Hepe-Chr2:58113966 1.97e-08 wgd
Hepe10g0900 Hepe-Chr10:28740608 Hepe02g2147 Hepe-Chr2:58113966 3.64e-111 wgd
Hepe02g2147 Hepe-Chr2:58113966 Hepe07g0909 Hepe-Chr7:11761970 5.20e-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72582 PF07714 PK_Tyr_Ser-Thr 9.70E-26 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2147 - - - 0.0