Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2213 ATGGTGTTATGTTGCTTCGAGTGGCACTTCGACTCCATCGCCGTCGCCATGAATCGCTCTCTTCCCACCTCCGTCATCCATTCCTATCTCTCCCCTTTTCGCCTTCTCCTTCCTTCCTCTCATTCTAATGCCAGATTTCTCCGATCGAACCGAATCCGGACGCGCCTTAACTTTGCTGTCACTGCGGACCTCTCCAAGTCTTTTTCTCTCAATTCTGCCTCCGAATTTCAGTTACCATGGATGGGTCCTGTTCCTGGCGATATTGCAGAAATTGAGGCATATTGTAGAATCTTTAGAACTGCTGAACGACTTCACTCAGTGCTGATGGATACTCTTTGTAATCCTTTCACTGGTGAATGTAGCGTTTCGTATGATGTTAAACCAGGCGAAAATCCACTAATTGAGGATAAAATAGTCTCTGTTCTTGGATGTATATTATCACTTCTAAACAAAGGAAGGGAGGATGTACTTTCTGGAAGATCATCTGCCATGCATTCTTTCCGGGGTTCAAATTTAGATGCAATGGAGGATAATCTTCCTCCATTGGCTGCCTTTAGGAGTGAGATGAAAAGGTGTTGCGAAAGCTTGCATGTTGCTCTTGAAAACTTTTTGACTCCTGGTGATGACCGGAGTTTGAATGTATGGAGGAAACTCCAGAGGCTGAAGAATGTCTGTTATGATTCTGGTTTTACTAGAGGGGAAGGTTATCCCTGCCATACATTGTTTGCCAATTGGAATCCTGTTTATCTACATAATTCCAAGGAAGAAAATTCGGCAAAAAATTCTGATGCAGCCTTTTGGAGTGGTGGTCAGGTAACAGAAGAAGGTCTGAAGTGGTTAATTGAGAGAGGATTTAAAACGATTGTTGATCTTAGGGTGGAGGCAGTGAAGGATGAATTCTATAGTGCATCCTTACATGAAGCTATTGATTCTGCGAAAGTTAAAGTGATCAAAATTCCTGTTGAAGTAAGGATTGCACCAACGGTGGATCAGGTTGAGAAGTTTGCATCGTTGGTTTCAGATGGTAGCAATGGGCTGATCTACCTTCATAGTAAGGAGGGTGTGTGGAGAACATCAGCCATGATATCCAGATGGAGGCAATATGTGACTCGCAGTGCATCACAGTTTGTCTCTAATCAGACGATTGCTCCAGGTGATATTCCCCTTAGAGACACCTCTCCCAAATTGGCACATAATCAAAACGGAGCAAAAGAATCGTTGGAAATTTCTAAAATTGGAGAAACGTTTCCATGTGAAGAAGACAATCAATCTTTGCTGCTAGAAAGTGCTCATCATAGTTCAATTAACAGAAAAAATTATGCAGAAACTGATAAAGTTAGTCAGAATGTAAATGGAGCTTATAACGGGCCTATTTCTACACAAGATCTGACATCTTTAAGAGCAGATAATAATGGGGAAGAGCATGTGTCCCAATTTGGCATTGAAACTGACCCTCTAAAGGCCCAGATTCCTCCATGCAATATTTTTTCAAGAAAAGAAATGTCCAACTTTTTTAGGACGAAGAAGATTTCTCCTCAAAACTACTTGCACCGTCAAATGAAAACAAAAGAAAAATGGCCACTTTATACGGAGTTACCTGCAAGCAGAGTTCAAAGATTTAGAGTTGACAATAGTGATCTTAAATCTGGGTTTGTTGAAGCAGGAAATGTTAATGGCAGCCCAAGTGTGAAAGATACGTCCTCAGAAACCAATTCTTTATCTACTACAAATATGAAGTATGTCAATGGTGATAGTCATGTATCAGCCAATCCTGTTCTTAATGTACTTGGAGTGGATGGAAGGAATCCTCCAACGACGGAAGCCTCTACTGCTGTTGGAGGTAAATTTCAGTCTAAGTCAGAAACAAATGGCTTAAAGAGCAATGGTCAAGCAACTTCAGTTTCTAGCAACGCTGACGTGGAATCTGTCGATGGAAATATGTGTGCTTCTGCCACCGGTGTTGTAAGGGTGCAATCAAGAAGGAAAGCTGAGATGTTTTTAGTTCGAACAGATGGGTTCTCATGTGCCAGAGAAAAAGTGACCGAATCCTCTTTGGCCTTTACTCATCCTAGTACACAGCAACAGATGCTTATGTGGAAAACCACTCCTAGGACTGTATTACTTCTGAAAAAGCTGGGTCAAGCGCTCATGGAAGAAGCTAAAGAGGTAGCCTCGTACTTGTATCATCAAGAGAGGATGAATGTCCTTGTCGAACCTGATGTACACGACATATTTGCAAGAATTCCAGGGTTTGGATTTGTCCAAACCTTTTACAGTCAAGACACCAGTGACCTGCATGAGAAAGTTGATTTTGTGGCATGCTTGGGTGGAGATGGGGTGATTCTCCATGCATCAAATTTATTTCGAGGTGCTGTTCCCCCGGTTGTTTCATTTAATCTCGGGTCTCTTGGATTTTTGACTTCCCACACTTTTGATGGTTACAGGCAGGACTTAAGACAAGTCATTCATGGAAATGATTCACTGGATGGCGTCTATATAACTCTAAGAATGCGTCTTCAGTGTGAAATATTTCGAAACGGAAAAGCTATTCCTGGGAAGGTATTTAATATTCTCAATGAGGTTGTTGTCGATCGAGGCTCCAATCCATACCTTTCTAAAATCGAATGTTATGAACATGATCGACTCATAACAAAGGTCCAGGGCGATGGAGTCATTGTGGCCACACCTACTGGAAGCACTGCTTACTCTACCGCAGCAGGGGGGTCTATGGTGCATCCGAACGTTCCTTGCATGCTTTTTACTCCAATCTGCCCCCATTCTCTCTCATTTAGACCAGTTATACTTCCAGACTCTGCACGACTCGAGTTAAAGATTCCCGAGGATGCACGAAGTAATGCGTGGGTTTCTTTCGATGGAAAGAGAAGGCAGCAACTCTCAAGAGGAGATTCTGTTAGGATATCCATGAGCAGGCATCCACTCCCAACTGTAAACAAGTCTGATCAAACTGGTGATTGGTTTCGCAGCTTGATTCGCTGCCTGAACTGGAATGAAAGGCTTGATCAGAAGGCCCTTTGA 3036 42.59 MVLCCFEWHFDSIAVAMNRSLPTSVIHSYLSPFRLLLPSSHSNARFLRSNRIRTRLNFAVTADLSKSFSLNSASEFQLPWMGPVPGDIAEIEAYCRIFRTAERLHSVLMDTLCNPFTGECSVSYDVKPGENPLIEDKIVSVLGCILSLLNKGREDVLSGRSSAMHSFRGSNLDAMEDNLPPLAAFRSEMKRCCESLHVALENFLTPGDDRSLNVWRKLQRLKNVCYDSGFTRGEGYPCHTLFANWNPVYLHNSKEENSAKNSDAAFWSGGQVTEEGLKWLIERGFKTIVDLRVEAVKDEFYSASLHEAIDSAKVKVIKIPVEVRIAPTVDQVEKFASLVSDGSNGLIYLHSKEGVWRTSAMISRWRQYVTRSASQFVSNQTIAPGDIPLRDTSPKLAHNQNGAKESLEISKIGETFPCEEDNQSLLLESAHHSSINRKNYAETDKVSQNVNGAYNGPISTQDLTSLRADNNGEEHVSQFGIETDPLKAQIPPCNIFSRKEMSNFFRTKKISPQNYLHRQMKTKEKWPLYTELPASRVQRFRVDNSDLKSGFVEAGNVNGSPSVKDTSSETNSLSTTNMKYVNGDSHVSANPVLNVLGVDGRNPPTTEASTAVGGKFQSKSETNGLKSNGQATSVSSNADVESVDGNMCASATGVVRVQSRRKAEMFLVRTDGFSCAREKVTESSLAFTHPSTQQQMLMWKTTPRTVLLLKKLGQALMEEAKEVASYLYHQERMNVLVEPDVHDIFARIPGFGFVQTFYSQDTSDLHEKVDFVACLGGDGVILHASNLFRGAVPPVVSFNLGSLGFLTSHTFDGYRQDLRQVIHGNDSLDGVYITLRMRLQCEIFRNGKAIPGKVFNILNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKIPEDARSNAWVSFDGKRRQQLSRGDSVRISMSRHPLPTVNKSDQTGDWFRSLIRCLNWNERLDQKAL 1011
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 62716523 62725249 + Hsped.02g22130.1 Hepe02g2213 563714

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2213 1011 Hamap NAD kinase [nadK]. 704 1002 IPR002504 GO:0003951(InterPro)|GO:0006741(InterPro)
Hepe02g2213 1011 Gene3D Protein tyrosine phosphatase superfamily 252 384 IPR029021 -
Hepe02g2213 1011 Pfam ATP-NAD kinase N-terminal domain 721 824 IPR002504 GO:0003951(InterPro)|GO:0006741(InterPro)
Hepe02g2213 1011 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 266 370 IPR029021 -
Hepe02g2213 1011 Pfam ATP-NAD kinase C-terminal domain 858 984 - -
Hepe02g2213 1011 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 707 1006 IPR016064 -
Hepe02g2213 1011 Gene3D - 838 978 IPR017437 GO:0003951(InterPro)|GO:0019674(InterPro)
Hepe02g2213 1011 Pfam DSP-PTPase phosphatase fused to NAD+ Kinase 237 376 - -
Hepe02g2213 1011 FunFam NAD kinase 2, chloroplastic 693 858 - -
Hepe02g2213 1011 Gene3D - 693 1003 IPR017438 -
Hepe02g2213 1011 MobiDBLite consensus disorder prediction 600 638 - -
Hepe02g2213 1011 MobiDBLite consensus disorder prediction 603 638 - -
Hepe02g2213 1011 PANTHER NAD KINASE 315 1011 - GO:0003951(PANTHER)|GO:0006741(PANTHER)
Hepe02g2213 1011 FunFam NAD kinase 2, chloroplastic 838 978 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2213 K00858 - - csv:101204002 1707.19
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2213 Hepe-Chr2:62716523 Hepe09g1130 Hepe-Chr9:13015328 2.32e-71 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g216 . . . . . . . . Cmo04g02505 Cmo15g00662 . . . . Sed01g3084 . . Bhi04g01869 Tan11g1240 Cmetu03g0963 . Hepe02g2213 . Lcy10g1253 Cla08g00622 Cam08g1036 Cec08g0626 Cco08g0737 Clacu08g0746 . Cre08g0554 Cone4ag1431 Cone7ag1504 . . . . . Cme03g00495 Blo17g00169 . . Bda13g01468 . Bpe14g00397 . Bma02g00204 . . . . . Car04g02311 Car15g00599 Cpe01g02074 . . . . . . . . . . . . . . . Lsi08g00462 . Chy03g00755 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007207 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 1 1 37