Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g2221 | ATGTCAGCACATAATCGCCGCCCGTCGTTTTCCTCGTCGACGTCCTCGTCCTTGGCCAAACGACAAGCGTCGTCGGCCGATATTGTCGGAAAGGTTATGGCAGTTCCACCGCACTTGGCGAAGAAGCGAGCGCCACTCGGTAACCTTACCAATCTTAAGAATGTTTCTCATACTGCTGCGAAAACCTCTGTTCCGCCTGCTATATTGGTGCCTTGTGCAACCAAAGCTGTCAAGGCCAGAAAGAGTTCTCCTGCTAGAACTCGTAGAACAAACTTGCCAGCGAATAATACGACGACATTGCTCGATGTCAAAACGACGAGTGCAGTTGCCCCTAGTAATGTTGCAGCTTTCTCAAGAACTGAGGCCACCGCGGTCTCTAGTAGTATGGACGTCTCTCCGACTAAATCAGATGGAGTTTCAGTTTCTGTAGATGAAACTATGTCTACTTGTGATTCTTTCAAGAGCCCCGACGTTGAGTACATGGACAATAATGATGTTCCTGCAGTTGATTCCGTTGAGAGGAAAACTAAAAGCAGTCTCTGCATTTCAGGTCACGCACCAATTAGTAGTCAGGCACCAATTAAAGGTAGTATATGCAATAGAGATGAACTTGCAGACATGGAAACCGATGATGATATCATTGATGTCGATACTGATTTCATGGATCCTCAACAATGTGCTACAATTGCTTGTGATATTTACAAGCACTTGCGAGCATCTGAGGCAAAGAAAAGGCCTTCTACAGACTTCATGGAAAAAGTTCAGAAGGATATAAATTCAAATATGCGCTCCATACTGGTTGATTGGCTTGTGGAGGTAGCAGAAGAGTACAGGCTTGTGCCAGATACTCTATATTTGACCGTGAACTACATAGATCGATACCTATCTGGAAATTCGATGGATCGACAACGGTTACAGTTGCTTGGTGTTGCTTGCATGATGATTGCATCAAAATATGAAGAGATTTGTGCTCCTCAAGTGGAAGAATTTTGTTACATAACTGATAACACATATTTTAAAGAAGAGGTATTGCAAATGGAATCTTCTGTCTTGAATTACTTGAAGTTCGAAATGACAGCTCCAACGCCGAAATGTTTCTTAAGGCGATTTGTTCGTGCTGCTCAAGGTGCCGATGAGGTTTCATCAATGCAGTTGGAGTGCTTGTCCAACTTCCTTGCTGAATTATCTCTTTTAGAATATAGTATGCTCGGCTACGCCCCGTCGCTTGTAGCTGCCTCAGCAATTTTCTTGGCGAAGTTCATTCTTCTCCCAACTAAGATACCATGGAACTCGACCTTGCAGCATTATACGCGTTATCAGCCATCCGATCTTGTCGACTGCGTTAAGGATTTACATCGCCTCTGCTGTAACACTCATAATTCTAGCTTACCAGCAATCAGAGAGAAATACAGCCAGCATAAGTACAAACACGTGGCGAAGAAGTGCTGCCCTCCGTCGATACCTCCGGAGTTCTTCCAGAATCAAACACAGTAG | 1494 | 44.38 | MSAHNRRPSFSSSTSSSLAKRQASSADIVGKVMAVPPHLAKKRAPLGNLTNLKNVSHTAAKTSVPPAILVPCATKAVKARKSSPARTRRTNLPANNTTTLLDVKTTSAVAPSNVAAFSRTEATAVSSSMDVSPTKSDGVSVSVDETMSTCDSFKSPDVEYMDNNDVPAVDSVERKTKSSLCISGHAPISSQAPIKGSICNRDELADMETDDDIIDVDTDFMDPQQCATIACDIYKHLRASEAKKRPSTDFMEKVQKDINSNMRSILVDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNSMDRQRLQLLGVACMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESSVLNYLKFEMTAPTPKCFLRRFVRAAQGADEVSSMQLECLSNFLAELSLLEYSMLGYAPSLVAASAIFLAKFILLPTKIPWNSTLQHYTRYQPSDLVDCVKDLHRLCCNTHNSSLPAIREKYSQHKYKHVAKKCCPPSIPPEFFQNQTQ | 497 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 62982401 | 62986078 | - | Hsped.02g22210.1 | Hepe02g2221 | 563722 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g2221 | 497 | ProSitePatterns | Cyclins signature. | 263 | 294 | IPR048258 | - | |
Hepe02g2221 | 497 | Pfam | Cyclin, N-terminal domain | 232 | 359 | IPR006671 | - | |
Hepe02g2221 | 497 | FunFam | Cyclin A1 | 348 | 480 | - | - | |
Hepe02g2221 | 497 | SMART | cyclin_7 | 365 | 453 | IPR013763 | - | |
Hepe02g2221 | 497 | SMART | cyclin_7 | 268 | 352 | IPR013763 | - | |
Hepe02g2221 | 497 | PANTHER | CYCLINS | 211 | 472 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Hepe02g2221 | 497 | SMART | Cyclin_C_2 | 361 | 484 | IPR004367 | - | |
Hepe02g2221 | 497 | SUPERFAMILY | Cyclin-like | 222 | 358 | IPR036915 | - | |
Hepe02g2221 | 497 | CDD | CYCLIN_AtCycA-like_rpt2 | 361 | 475 | - | - | |
Hepe02g2221 | 497 | CDD | CYCLIN_AtCycA_like_rpt1 | 222 | 357 | - | - | |
Hepe02g2221 | 497 | SUPERFAMILY | Cyclin-like | 361 | 486 | IPR036915 | - | |
Hepe02g2221 | 497 | Pfam | Cyclin, C-terminal domain | 361 | 482 | IPR004367 | - | |
Hepe02g2221 | 497 | Gene3D | - | 246 | 359 | - | - | |
Hepe02g2221 | 497 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Hepe02g2221 | 497 | FunFam | Mitotic cyclin 6 | 246 | 346 | - | - | |
Hepe02g2221 | 497 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Hepe02g2221 | 497 | PIRSF | Cyclin_A_B_D_E | 1 | 490 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Hepe02g2221 | 497 | Gene3D | - | 232 | 480 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g0610 | Hepe-Chr1:67392318 | Hepe02g2221 | Hepe-Chr2:62982401 | 2.53e-11 | dispersed | |
Hepe02g2221 | Hepe-Chr2:62982401 | Hepe08g1309 | Hepe-Chr8:14807717 | 1.11e-93 | dispersed | |
Hepe02g2221 | Hepe-Chr2:62982401 | Hepe03g1583 | Hepe-Chr3:72721886 | 3.33e-100 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g2221 | K06627 | - | csv:101221569 | 872.848 |