Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe02g2229 | ATGGCAAGTCAGCAGAAGGAAGCACAGATGAGTACGGCGGCGACACCGTCTTTTGGCGGTGGCAGCAACCGCATAGCGGCGGTGAACACGACTCCGATCGACGACGCCGTCAAACCACCAAATCACCAAGAACACAATCAGAAACCTGGATGGAGAAAGTTTCTTTCACACGTTGGCCCTGGCTTCCTGGTCTCATTGGCTTACCTTGATCCGGGCAACTTGGAAACCGACTTGCAGGCTGGAGCTAATCACGGATACGAGCTTCTATGGGTGGTGCTTATCGGATTAATATTTGCGCTCATAATCCAATCCCTCGCTGCAAATCTTGGCGTAAGCACTGGAAAACACCTTTCAGAAGTCTGCAAAGCCGAATATCCAAAATTTGTGAAGTACTGCCTTTGGTTGCTGGCTGAACTTGCTGTAATAGCCGCCGATATTCCAGAAGTGATAGGAACAGCCTTTGCCCTGAATATACTATTCCATATCCCAGTTTGGGCTGGAGTTCTTCTCACCGGTTTAAGCACCCTCTTGCTCATTGGACTCCAAAGATATGGGGTGAGGAAGCTGGAATTGCTGATAGCAATATTGGTATTCGTAATGGCGGCGTGTTTCTTCGGGGAAATGAGTTACGTTAAGCCTCCGGCGAGCGGCGTTTTAAAAGGAATGTTTGTGCCCAAACTCAACGGCCAGGGTGCCACCGGCGACGCCATTGCTCTTCTCGGCGCTCTCGTTATGCCCCACAACCTGTTTCTTCATTCCGCTCTCGTGCTCTCAAGGAAAGTGCCCAATTCCGTTCGTGGTATCAACGACGCGTGCAGGTACTTCCTAATAGAGAGCGGATTTGCATTGCTGGTGGCATTTTTGATAAACGTGGCCGTGGTTTCAGTTTCCGGCACCGTTTGTACGGTCGGAAACGTTTCTGAAACCACCGCCGATCAGTGCTCCGATATAACCCTCAACTCCGCCTCCTTCCTCCTCCAGAATGTTTTGGGAAAATCGAGCTCCACTATTTACGCCATAGCGTTGCTTGCCTCCGGACAAAGCTCCAGCATCACCGGCACTTATGCCGGACAGTTCATCATGCAGGGATTCTTGGACCTGAAAATGAAAACCTGGGCAAGGAACCTCTTGACTCGGTCCATTGCCATTACGCCCAGTCTCATCGTCTCCATTATTGGTGGACCTCAAGGAGCTGGTCGTCTCATCATTATTGCTTCGATGATTCTTTCGTTCGAGCTTCCATTTGCTCTAATTCCGCTGCTGAAATTCAGTAGCAGCAGCACGAAGATGGGCCCCCACAAGAATTCCATATACATCATTGTAATCTCATGGATATTGGGCCTGGCAATCATCGGCATCAACATCTATTATCTTAGTACGGCCTTCGTGGGCTGGCTAATCCACAACCATTTACCCAAACTTGCAAATGTATTCATTGGGCTCGTCGTCTTTCCTTTCATGGCCTTGTATATTCTCTCTGTTATTTACTTAACCTTTCGAAAAGATAGGGTTGTCACTTACATTGAGCCCGAAAAGTACGACCCGATGGCCCAAGCCCATATGGAAAATGGGCTCAGTAATTCTTTTGGGCCTGGTGACGTCGCCCCGGTTCCTTTTAGAGAGGATTTGGCCCATATCCCACTTCCAGAATAG | 1653 | 49.24 | MASQQKEAQMSTAATPSFGGGSNRIAAVNTTPIDDAVKPPNHQEHNQKPGWRKFLSHVGPGFLVSLAYLDPGNLETDLQAGANHGYELLWVVLIGLIFALIIQSLAANLGVSTGKHLSEVCKAEYPKFVKYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWAGVLLTGLSTLLLIGLQRYGVRKLELLIAILVFVMAACFFGEMSYVKPPASGVLKGMFVPKLNGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRYFLIESGFALLVAFLINVAVVSVSGTVCTVGNVSETTADQCSDITLNSASFLLQNVLGKSSSTIYAIALLASGQSSSITGTYAGQFIMQGFLDLKMKTWARNLLTRSIAITPSLIVSIIGGPQGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSIYIIVISWILGLAIIGINIYYLSTAFVGWLIHNHLPKLANVFIGLVVFPFMALYILSVIYLTFRKDRVVTYIEPEKYDPMAQAHMENGLSNSFGPGDVAPVPFREDLAHIPLPE | 550 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 63236468 | 63242258 | + | Hsped.02g22290.1 | Hepe02g2229 | 563730 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe02g2229 | 550 | PRINTS | Natural resistance-associated macrophage protein signature | 186 | 207 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g2229 | 550 | PRINTS | Natural resistance-associated macrophage protein signature | 161 | 180 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g2229 | 550 | PRINTS | Natural resistance-associated macrophage protein signature | 374 | 391 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g2229 | 550 | PRINTS | Natural resistance-associated macrophage protein signature | 346 | 365 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g2229 | 550 | PRINTS | Natural resistance-associated macrophage protein signature | 236 | 259 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g2229 | 550 | PRINTS | Natural resistance-associated macrophage protein signature | 133 | 159 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g2229 | 550 | PRINTS | Natural resistance-associated macrophage protein signature | 406 | 425 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g2229 | 550 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Hepe02g2229 | 550 | Pfam | Natural resistance-associated macrophage protein-like | 75 | 436 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g2229 | 550 | PANTHER | SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER | 42 | 509 | IPR001046 | GO:0005384(PANTHER)|GO:0015086(PANTHER)|GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g2229 | 550 | Hamap | Divalent metal cation transporter MntH [mntH]. | 40 | 462 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) | |
| Hepe02g2229 | 550 | NCBIfam | Nramp family divalent metal transporter | 59 | 425 | - | - | |
| Hepe02g2229 | 550 | NCBIfam | metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family | 52 | 428 | IPR001046 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g1296 | Hepe-Chr2:16332563 | Hepe02g2229 | Hepe-Chr2:63236468 | 6.66e-209 | dispersed | |
| Hepe02g2229 | Hepe-Chr2:63236468 | Hepe08g1166 | Hepe-Chr8:11915835 | 2.82e-102 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe02g2229 | K21398 | - | csv:101219356 | 966.452 |