Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2242 ATGGAGTTGAAAGCAGATCATATAGCAGAAATCCAACAAGTACAGCAACATTTTCATGTGCTGGCAGTGGATGATAGCCTTATAGACAGAAAGCTTTTGGAAAAGCTTCTAAGAATTTCTTCATGCGAAGTCACCTGCGTGGAGTCTGGGGACAAAGCTCTTAGATATTTGGGTCTTCTTGATGACCTTGACAAATTTTCTTCTTCTCCTCCTTCATTTTCTTCCCCACAACTCTCCCAACAACAGGAAGTCAAAGTCAACCTAATCATGACAGACTACTGTATGCCTGGGATGACTGGTTATGATCTACTCAAACGACTCAAGGGATCTTCATGGAAAGATATTCCTGTTGTTGTCATGTCATCAGAGAACGAGCCTTCAAGAATCAACATGTGCATGGAAGAAGGGGCAGAGGAATTCCTTTTGAAGCCTATTCAACTATCAGACGTGAAGAAGCTGGAGCCTCACCTTCAAAAGTCGCTCAGCCGTTGTTCTGCAGAAATAAAGGAAGAAGAAGCCATCGCAATCGGAATCAGTAACTCGGATGAAAAGAACTGGAAAGAAGACAGTAAGAAGAACGAGAATTATAACAATAGCTTGAGCAAGAGAAAGGCCGCGAATCCAGAGCCATCTGAAAGAAGACCAAAAGTGAAAGAATTGCAAGGTGGAGTATAA 675 42.22 MELKADHIAEIQQVQQHFHVLAVDDSLIDRKLLEKLLRISSCEVTCVESGDKALRYLGLLDDLDKFSSSPPSFSSPQLSQQQEVKVNLIMTDYCMPGMTGYDLLKRLKGSSWKDIPVVVMSSENEPSRINMCMEEGAEEFLLKPIQLSDVKKLEPHLQKSLSRCSAEIKEEEAIAIGISNSDEKNWKEDSKKNENYNNSLSKRKAANPEPSERRPKVKELQGGV 224
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 63796930 63799861 + Hsped.02g22420.1 Hepe02g2242 563743
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2242 224 MobiDBLite consensus disorder prediction 182 198 - -
Hepe02g2242 224 Pfam Response regulator receiver domain 80 151 IPR001789 GO:0000160(InterPro)
Hepe02g2242 224 MobiDBLite consensus disorder prediction 179 224 - -
Hepe02g2242 224 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 215 IPR045279 GO:0009736(InterPro)
Hepe02g2242 224 Gene3D - 19 210 - -
Hepe02g2242 224 MobiDBLite consensus disorder prediction 206 224 - -
Hepe02g2242 224 ProSiteProfiles Response regulatory domain profile. 19 158 IPR001789 GO:0000160(InterPro)
Hepe02g2242 224 SUPERFAMILY CheY-like 18 152 IPR011006 -
Hepe02g2242 224 CDD REC_typeA_ARR 20 153 - -
Hepe02g2242 224 SMART REC_2 18 154 IPR001789 GO:0000160(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2242 Hepe-Chr2:63796930 Hepe02g2525 Hepe-Chr2:71971938 1.90e-54 dispersed
Hepe01g2292 Hepe-Chr1:87499798 Hepe02g2242 Hepe-Chr2:63796930 5.43e-60 transposed
Hepe02g2242 Hepe-Chr2:63796930 Hepe05g0710 Hepe-Chr5:12677465 3.90e-55 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55080 PF00072 Response_reg 3.80E-15 CL0304 Hepe TR
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2242 K14492 - csv:101216267 284.648