Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe02g2242 | ATGGAGTTGAAAGCAGATCATATAGCAGAAATCCAACAAGTACAGCAACATTTTCATGTGCTGGCAGTGGATGATAGCCTTATAGACAGAAAGCTTTTGGAAAAGCTTCTAAGAATTTCTTCATGCGAAGTCACCTGCGTGGAGTCTGGGGACAAAGCTCTTAGATATTTGGGTCTTCTTGATGACCTTGACAAATTTTCTTCTTCTCCTCCTTCATTTTCTTCCCCACAACTCTCCCAACAACAGGAAGTCAAAGTCAACCTAATCATGACAGACTACTGTATGCCTGGGATGACTGGTTATGATCTACTCAAACGACTCAAGGGATCTTCATGGAAAGATATTCCTGTTGTTGTCATGTCATCAGAGAACGAGCCTTCAAGAATCAACATGTGCATGGAAGAAGGGGCAGAGGAATTCCTTTTGAAGCCTATTCAACTATCAGACGTGAAGAAGCTGGAGCCTCACCTTCAAAAGTCGCTCAGCCGTTGTTCTGCAGAAATAAAGGAAGAAGAAGCCATCGCAATCGGAATCAGTAACTCGGATGAAAAGAACTGGAAAGAAGACAGTAAGAAGAACGAGAATTATAACAATAGCTTGAGCAAGAGAAAGGCCGCGAATCCAGAGCCATCTGAAAGAAGACCAAAAGTGAAAGAATTGCAAGGTGGAGTATAA | 675 | 42.22 | MELKADHIAEIQQVQQHFHVLAVDDSLIDRKLLEKLLRISSCEVTCVESGDKALRYLGLLDDLDKFSSSPPSFSSPQLSQQQEVKVNLIMTDYCMPGMTGYDLLKRLKGSSWKDIPVVVMSSENEPSRINMCMEEGAEEFLLKPIQLSDVKKLEPHLQKSLSRCSAEIKEEEAIAIGISNSDEKNWKEDSKKNENYNNSLSKRKAANPEPSERRPKVKELQGGV | 224 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 63796930 | 63799861 | + | Hsped.02g22420.1 | Hepe02g2242 | 563743 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe02g2242 | 224 | MobiDBLite | consensus disorder prediction | 182 | 198 | - | - | |
| Hepe02g2242 | 224 | Pfam | Response regulator receiver domain | 80 | 151 | IPR001789 | GO:0000160(InterPro) | |
| Hepe02g2242 | 224 | MobiDBLite | consensus disorder prediction | 179 | 224 | - | - | |
| Hepe02g2242 | 224 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 14 | 215 | IPR045279 | GO:0009736(InterPro) | |
| Hepe02g2242 | 224 | Gene3D | - | 19 | 210 | - | - | |
| Hepe02g2242 | 224 | MobiDBLite | consensus disorder prediction | 206 | 224 | - | - | |
| Hepe02g2242 | 224 | ProSiteProfiles | Response regulatory domain profile. | 19 | 158 | IPR001789 | GO:0000160(InterPro) | |
| Hepe02g2242 | 224 | SUPERFAMILY | CheY-like | 18 | 152 | IPR011006 | - | |
| Hepe02g2242 | 224 | CDD | REC_typeA_ARR | 20 | 153 | - | - | |
| Hepe02g2242 | 224 | SMART | REC_2 | 18 | 154 | IPR001789 | GO:0000160(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g2242 | Hepe-Chr2:63796930 | Hepe02g2525 | Hepe-Chr2:71971938 | 1.90e-54 | dispersed | |
| Hepe01g2292 | Hepe-Chr1:87499798 | Hepe02g2242 | Hepe-Chr2:63796930 | 5.43e-60 | transposed | |
| Hepe02g2242 | Hepe-Chr2:63796930 | Hepe05g0710 | Hepe-Chr5:12677465 | 3.90e-55 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 55080 | PF00072 | Response_reg | 3.80E-15 | CL0304 | Hepe | TR |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe02g2242 | K14492 | - | csv:101216267 | 284.648 |