Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2282 ATGGAGTCAGTTTTAACCAATCCTAATGATGTGAATTTTGACCCTTCGTCGGGAGGTCGTGTTACGCGTCGAATTTCATCCTGGGCTTGTGCTATTGTTGCTCGGGCTCGCTCGTTGGGTCCCTTGACCCAAGAAATCTTAGATAATCTTAAGATTTCCTATAACGTTCATGCAGATGTTAGGATAAGGGTGTTAGTTATTGGAGAGAGACCAGAGTTTTCTCCTCCTAAAGAGCGGAACTCGCGCGCCTCTATTTTATACTACCCCAGTCCTCGTCTGACCGACGGGGAATCTATCGTCAGGTCCGACCCTAGGGGCCAGCTTCCTGTTATCCCAGTCGATCCCATGGGGATCGACACCTTAGGTGTAGGTCTGATCCTACAGGGATTGGTTTTCTTTAGAGTGAGGTTGACCCCGTTGGGGTCAACTTCCCTTATGCTCGATCGACCCTATAGGGGTCGACTCTTTTATGGCAAGTCCGACCCTACGAGGTATGTATTCCCGCCGAGTGATGTCCGTGGCGGATCACCTGAAATTAGCTGGTCTCTGATGGACGACCGACTCAGAGGCAACACACTCTTTCACATTCTCCATCCCAATCAAGCACTTAGGTTGGCGCACCCCATCTTATCCCTTTGTTTGTTGAATGGAGTTCCTATGGAGTCGAGTCGATTGACTTTGATGGGCCATTTCATTTATATTTTGATGAGGCGACTCTCTTGGAGCGTGTATTGTCTGCCTAATCTGGATTTTCTAGATATGACTGCATCGACTCATCGACTTTCCGATGAGATTATTCATCTTCAGTCATTCTCCTTACACACTTTGAGAGCCCATAATTTTCTTCCTCCGCACAGAGAAGAATCGGTGCGAGTTGCAGAAGAGCAAAAAATGGCGGAGGAATTACAGGACAACGATGCTCCCAACGACGACGCCATGGATGTACCTGTTGATATTGAGACCAAGATTCACAACGCTATGCTCTCCCGTGTCTCTCACTTCAAGGAACAAGCCGACTCTTTAACTTTTGAGGGGGTTAGAAGATTGTTAGAAAAGGACTTGTGTTTGGACACGTATGCTTTAGATGTGCATAAAAGATATATCAAGCAGTGTTTGGTGAAGTGTTTAGAAGGTGTTGAGGAAGACAATGCCTCAAAGGATTCTGAGGAGACTGGGGGTAAAAGTAGAGAAGAAGTGGCTGAGTCACTTGAAGGGCATCAGTCCAAGAAAGGTGTAAAGGAACCTTGCTTAGAAGATGAGGAGAAAATGGAAGACTCTCCAGTTATGGGCCTTCTCACAGGACGTAAAGGTAAAACAACAAATGTTGAATCTGACGGAATCAAAGGAGTCAAAGACAAAGATGACAAAGATATTCCTAGTGAGAGTACAATCAAGAAAGCTATCAGAAAAAGAATTCCTTATTTTAAAGCTAATTCGGAGAAAGTTACTATGGCTGGAGTTCGCCGTCTTCTGGAGGATGACCTTAAACTTACTAAATATGCTCTGGATAATTCCAAGAAGTTTATAAGCCAACAAGTAGAGGAGATATTGAATTCTTGTGAAGCTGCTGAGCAAGCTTCTAATGAAAAGAAAGGTTCTCGTTTGAAAACTCCAAAAAAGGTAAGCGAAGAAAGCTCTCATTCTACAGAAGGGAGCAGTAGTGAGGAGGAAAACGATGAAGTAAAACCTGGAAAGAAAAATGCAACTAAAGGAAGAGTACCGAACTCTAATGAAATGAAAAAACGGAAAAGATCTACAAAGGAGACTGTCTCTGCCAAGAAGCAAAGCAAGCATGTCCAGCATACATCAGAGAAAGATAGTGATGAAGAAGGTGGTGAAAATGTCTCTGAAGATGGCCAGTCTGAATCATCCAATGAAAAACCTGTTAAGAAGGAAGTTTCAACTCCTGTCTATGGCAAGCGTGTGGAGCAATTGAAATCGGTTATCAAATCATGTGGGATGAGTGTTCCTCCATCGATTTATAAGAAAGTCAAGCAGGCACCTGAAAGCAAACGTGAATCACAACTTATAAAGGAGTTGGAGGGGATACTATCCAGAGAAGGACTGTCTGCTAATCCCTCTGAAAAAGAAATTAAGGAAGTCAAAAAGAAGAAGGAAAGGGCCAGAGAACTTGAAGGCATTGACATGAGTAATATTGTCTTAAGTTCACGTAGAAGATCTACAACCAGTTATGTACCACCACCACCACCTCCAAAACCGAAAATACCAGTTGAAACTGATGGTGGTGGTGATGATGATACTGATGAGGAGGAGGAGGAGGAGGAGGAGGATGACGAAGAAGAGGAGGAGGATGACGATGACGAAGAGGATAATGGTGGTGGTGATGAAAGCCAGGGTGAAGAATTCAATGAGGATGACAATGAAGACAGTGATTAA 2397 43.85 MESVLTNPNDVNFDPSSGGRVTRRISSWACAIVARARSLGPLTQEILDNLKISYNVHADVRIRVLVIGERPEFSPPKERNSRASILYYPSPRLTDGESIVRSDPRGQLPVIPVDPMGIDTLGVGLILQGLVFFRVRLTPLGSTSLMLDRPYRGRLFYGKSDPTRYVFPPSDVRGGSPEISWSLMDDRLRGNTLFHILHPNQALRLAHPILSLCLLNGVPMESSRLTLMGHFIYILMRRLSWSVYCLPNLDFLDMTASTHRLSDEIIHLQSFSLHTLRAHNFLPPHREESVRVAEEQKMAEELQDNDAPNDDAMDVPVDIETKIHNAMLSRVSHFKEQADSLTFEGVRRLLEKDLCLDTYALDVHKRYIKQCLVKCLEGVEEDNASKDSEETGGKSREEVAESLEGHQSKKGVKEPCLEDEEKMEDSPVMGLLTGRKGKTTNVESDGIKGVKDKDDKDIPSESTIKKAIRKRIPYFKANSEKVTMAGVRRLLEDDLKLTKYALDNSKKFISQQVEEILNSCEAAEQASNEKKGSRLKTPKKVSEESSHSTEGSSSEEENDEVKPGKKNATKGRVPNSNEMKKRKRSTKETVSAKKQSKHVQHTSEKDSDEEGGENVSEDGQSESSNEKPVKKEVSTPVYGKRVEQLKSVIKSCGMSVPPSIYKKVKQAPESKRESQLIKELEGILSREGLSANPSEKEIKEVKKKKERARELEGIDMSNIVLSSRRRSTTSYVPPPPPPKPKIPVETDGGGDDDTDEEEEEEEEDDEEEEEDDDDEEDNGGGDESQGEEFNEDDNEDSD 798
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 65951528 65964046 + Hsped.02g22820.1 Hepe02g2282 563783

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2282 798 MobiDBLite consensus disorder prediction 575 609 - -
Hepe02g2282 798 MobiDBLite consensus disorder prediction 382 426 - -
Hepe02g2282 798 MobiDBLite consensus disorder prediction 520 638 - -
Hepe02g2282 798 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 458 518 IPR014876 -
Hepe02g2282 798 MobiDBLite consensus disorder prediction 623 637 - -
Hepe02g2282 798 MobiDBLite consensus disorder prediction 382 437 - -
Hepe02g2282 798 Coils Coil 285 305 - -
Hepe02g2282 798 Coils Coil 756 776 - -
Hepe02g2282 798 MobiDBLite consensus disorder prediction 527 567 - -
Hepe02g2282 798 MobiDBLite consensus disorder prediction 688 798 - -
Hepe02g2282 798 SMART CHZ_2 705 740 IPR019098 -
Hepe02g2282 798 Pfam Histone chaperone domain CHZ 706 734 IPR019098 -
Hepe02g2282 798 PANTHER HIRA-INTERACTING PROTEIN 3 298 797 IPR037647 GO:0005634(PANTHER)
Hepe02g2282 798 MobiDBLite consensus disorder prediction 749 798 - -
Hepe02g2282 798 MobiDBLite consensus disorder prediction 692 713 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2282 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2282 Hepe-Chr2:65951528 Hepe05g1146 Hepe-Chr5:56521412 9.24e-08 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g282 . . . . . . . . . Cmo15g00703 . . . . Sed03g0794 . . Bhi04g01926 Tan11g1290 Cmetu03g0298 . Hepe02g2282 . Lcy10g1217 Cla08g00580 Cam08g0995 Cec08g0584 Cco08g0694 Clacu08g0704 . Cre08g0515 . . . Cone20ag0450 . . . Cme03g00572 Blo17g00180 . . . . Bpe14g00380 . Bma02g00220 . . . . . . Car15g00634 . . . . . . . . . . . . . . . . Lsi08g00426 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011404 0 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 2 1 2 1 1 31