Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2313 ATGGCATCTGCCATGGCCAAAGCCAAAACACAGAGAAAGCTTATCAGACAGACTCATGAAAACCAGAAACCGAAGCCGCAGAAGGCAGAGAAGCCGCCGTCTTGGGCAGTTGTTAGAGGCATATTCAGTTGCAAGTACCTGCAGCCTCAACAACAACAACCAGAAAAACAACAACATCATCAATTGCCACGAAAAGAGAAACAACAGGAGCAAACAACAGAGGAAAGTAGCAAAAACTGTAAGAAAATGAGGTGTTCAGGTTCACTCTGTAGCAACACCAAGGTAACACACAGGCTTGAAGTAGCAGCATTGCCGGAAATTCACAAGAAAAGGGCATTAACTTCAATGAGTTCCAAAAACAATGAGTCTTCGAGTTCAAGAAGATCCACGAAAGCTCCTCCTTTGAACGAACAAAACGGTGTTCTATCAGCCACATGTTCATCGTTATCTGAATCATCTTCTTCTAATTCCTCCAATGGTGCTTCTTCCAGAGGAATGCCTTTCAGGAGATTCTATGGCTGTTATGAATGTAAAATGGTGATTGACCCTGTTCTTGGAATGACTAGAGATCCTTCTCTTAGAGCAACCATTTGCCCTTGTCCTCAATGTGGTGAGATTTTCATGAAAGCTGAAACTCTAGAGCTTCATCAGAGTGTTAGACATGCAGTATCTGAACTTGGACCTGAAGACACGAGCAAGAACATAGTGGAAATAATATTCCAGTCGAGCTGGCTGAAAAAGCAAACCCCAATTTGCAAAATTGAAAGAATTCTCAAAGTCCAGAATACTCCAAAAACCATCTCGAAATTCGAGGAATACAGGGACTCCATTAAAGCCAAAGCCACCAAGCTTCCAAAGAAGCACCCACGTTGCATAGCAGACGGCAACGAACTCCTAAGGTTCCACTGCACCACATTGGCCTGCTCATTGGGCCTAAATGGCTCCTCCAACCTCTGCAGTTCAATTCCACAATGCAATGTCTGTAGCATAATCAAGAATGGGTTCAAGGTGGCTGCAGCTGCAGAGGCCACCGGAGGGGACGCCGGACAGGGCATTCTAACAACTGCAACAAGTGGAAAGGCTCATGACAGTGCCGGAATATCATCGGACGGCAAAGACAAACGAGCAATGCTGGTTTGCCGGGTAATAGCTGGCAGAGTGAAGAAGAGTTCAGAAGGAAGCATGGAGGATTATGACTCATTGGCTGGAGCAGCAGGCATGTATTCCAATTTGGATGAGTTATACGTGTTCAGTCCTAAGGCAATATTGCCTTGTTTTGTTGTCATTTATGGAGGGTTTTAA 1302 44.78 MASAMAKAKTQRKLIRQTHENQKPKPQKAEKPPSWAVVRGIFSCKYLQPQQQQPEKQQHHQLPRKEKQQEQTTEESSKNCKKMRCSGSLCSNTKVTHRLEVAALPEIHKKRALTSMSSKNNESSSSRRSTKAPPLNEQNGVLSATCSSLSESSSSNSSNGASSRGMPFRRFYGCYECKMVIDPVLGMTRDPSLRATICPCPQCGEIFMKAETLELHQSVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPICKIERILKVQNTPKTISKFEEYRDSIKAKATKLPKKHPRCIADGNELLRFHCTTLACSLGLNGSSNLCSSIPQCNVCSIIKNGFKVAAAAEATGGDAGQGILTTATSGKAHDSAGISSDGKDKRAMLVCRVIAGRVKKSSEGSMEDYDSLAGAAGMYSNLDELYVFSPKAILPCFVVIYGGF 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 67059264 67061199 - Hsped.02g23130.1 Hepe02g2313 563814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2313 433 ProSitePatterns Zinc finger C2H2 type domain signature. 198 221 IPR013087 -
Hepe02g2313 433 ProSiteProfiles Zinc finger C2H2 type domain profile. 198 226 IPR013087 -
Hepe02g2313 433 MobiDBLite consensus disorder prediction 13 27 - -
Hepe02g2313 433 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 34 430 - -
Hepe02g2313 433 SUPERFAMILY ADP-ribosylation 223 431 - -
Hepe02g2313 433 Gene3D - 222 431 - -
Hepe02g2313 433 MobiDBLite consensus disorder prediction 116 139 - -
Hepe02g2313 433 MobiDBLite consensus disorder prediction 58 78 - -
Hepe02g2313 433 MobiDBLite consensus disorder prediction 1 78 - -
Hepe02g2313 433 MobiDBLite consensus disorder prediction 110 139 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1619 Hepe-Chr1:81436104 Hepe02g2313 Hepe-Chr2:67059264 4.95e-106 dispersed
Hepe02g2313 Hepe-Chr2:67059264 Hepe08g0741 Hepe-Chr8:6672856 2.58e-59 dispersed
Hepe02g2313 Hepe-Chr2:67059264 Hepe07g1110 Hepe-Chr7:19100442 5.87e-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55085 None None None None Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2313 - - - 0.0