Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2333 ATGCATCATCTGCCTCACTTTTTCTCTCCTAGGAAGCGAACCAAACCCATGGATCCCAGGAAATCCGGAGCTAAGCCTAAGCTTGGCCGTGTTAATGCCGCCAAGAACATCGACTACGACGCTCCCTCCTCGTCTTCTTCGCTTGAGGATTCTTCTGGCTCTCTTTACACTCGCTCCATGGCGACCCACCATCCCTCCAGCATCCGGATTGAAGGCCTTGACGGTGAAGTTGATTTCATATATCGGTCTTTAGGGCTAGATGGTCCTGACGACTTGGCTATTCCGATGGAGGCTTGGGAGGCCAGAAAAGTCCGTTCATCTTCCGAGCTTCTACCCAGGTCGAGGTTGTACCCTATGGATAGCCCGAAGAGCGACGAGGTTAGTAAGGTGAAGGAAGTTAAAGAAATCGAAGATGAATTGTCTCGGAGGGTTAAGGATTCTCTTCGAATTAGCCTCGTCGAGCAATCCACACCCAAGCCCGAATTTCTTGAGTTGTATGAACGCCGTATGGCTACTGCTTCCGGATCTAGCTCGAGAAGTGGAATCAATGGTGCTCGCCCTCCGTTACTCCAGCCGCCGCCGTCCATGCGGCTTCCGGATTTCGATAATACTTCCTCGACTTGGGACATTTTGAAAGGTTTTGCTCCATTAGTTGAAGATGAGAATCAGGATGATGTAGTCGGAGAAGGAGAGGGAAATGTTGTCAGGCCGGTGGACATAGGGTCTTGTTGTTCCTTCACAACCTCGAATGACGATGATTGTTCGAGCAGTACTACGGAGCCTGCAAATATTTCACCCAATATGAAATTTAAACCCATCATCACATCTTGGGTTCCGGGAAGGCTTCTAGGGCGCGGTTCATTTGGATCAGTATTCGAAGCAATTTCAGGGGATGGGACCTTTTTTGCAATTAAGGAAGTTTCACTGCTCGATCAAGACAGTCAGGGAAGACAAAGTATCTATCAACTTGAGCAGGAGATAGCTCTTCTAAGTGAGTTTGAGCATGAGAACATAGTTCAGTACTACGGCACACATACGGATGAGTCAAAACTCTATATCTTCCTTGAGCTTGTATCTCAAGGCTCCCTTATGAGTCTATATCAGAGGGTTCACCTTATGGATTCCATTGTTGCTGCCTATACAAGGCAGATTCTGTCTGGTTTAAAGTATCTTCATGAACGAAATGTGGTTCACAGGGATATTAAATGTGCTAATATATTGGTGGATGTGAATGGATCTGTGAAGCTTGCAGATTTTGGTTTGGCGAAGGCAACAAAATTGAACGATGTTAAATCTTGTAAGGGAACTGCGTTCTGGATGGCACCTGAGGTGGTTAATAGGAAGGGCCAAGGATATGGTCTTCCGGCCGATATCTGGAGCCTTGGGTGCACAGTATTGGAAATGTTAACTCGAAAGCTTCCATACTCGGAATTTGAATCTCATATGCAGGCCCTATATAAGATTGGAAAAGGTGTGGCGCCTGCCGTATCGGAGTCCCTCTCAAAAGATGGACAGGATTTCATCCTGCAGTGCCTACAAGTTAATCCGCGTGATCGTCCTACTGCTGCTGATCTTTTAAATCATCCGTTTGTACAAAGACAAGTTTCCAGTTTATCAGGGTTGGCATCTCCTCACAACAGGCCAGGCAGAAGGATTTAA 1659 46.78 MHHLPHFFSPRKRTKPMDPRKSGAKPKLGRVNAAKNIDYDAPSSSSSLEDSSGSLYTRSMATHHPSSIRIEGLDGEVDFIYRSLGLDGPDDLAIPMEAWEARKVRSSSELLPRSRLYPMDSPKSDEVSKVKEVKEIEDELSRRVKDSLRISLVEQSTPKPEFLELYERRMATASGSSSRSGINGARPPLLQPPPSMRLPDFDNTSSTWDILKGFAPLVEDENQDDVVGEGEGNVVRPVDIGSCCSFTTSNDDDCSSSTTEPANISPNMKFKPIITSWVPGRLLGRGSFGSVFEAISGDGTFFAIKEVSLLDQDSQGRQSIYQLEQEIALLSEFEHENIVQYYGTHTDESKLYIFLELVSQGSLMSLYQRVHLMDSIVAAYTRQILSGLKYLHERNVVHRDIKCANILVDVNGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVNRKGQGYGLPADIWSLGCTVLEMLTRKLPYSEFESHMQALYKIGKGVAPAVSESLSKDGQDFILQCLQVNPRDRPTAADLLNHPFVQRQVSSLSGLASPHNRPGRRI 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 67726739 67732451 - Hsped.02g23330.1 Hepe02g2333 563834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2333 552 Gene3D Transferase(Phosphotransferase) domain 1 276 546 - -
Hepe02g2333 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g2333 552 Pfam Protein kinase domain 280 531 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2333 552 MobiDBLite consensus disorder prediction 173 195 - -
Hepe02g2333 552 SMART serkin_6 277 531 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2333 552 MobiDBLite consensus disorder prediction 1 53 - -
Hepe02g2333 552 FunFam Mitogen-activated protein kinase 1, putative, expressed 275 543 - -
Hepe02g2333 552 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 115 534 IPR050538 -
Hepe02g2333 552 MobiDBLite consensus disorder prediction 11 25 - -
Hepe02g2333 552 MobiDBLite consensus disorder prediction 38 53 - -
Hepe02g2333 552 ProSiteProfiles Protein kinase domain profile. 277 531 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2333 552 ProSitePatterns Protein kinases ATP-binding region signature. 283 305 IPR017441 GO:0005524(InterPro)
Hepe02g2333 552 SUPERFAMILY Protein kinase-like (PK-like) 276 536 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2333 Hepe-Chr2:67726739 Hepe07g0143 Hepe-Chr7:1310318 1.76e-73 dispersed
Hepe07g1514 Hepe-Chr7:51521215 Hepe02g2333 Hepe-Chr2:67726739 1.31e-15 dispersed
Hepe09g1056 Hepe-Chr9:11242472 Hepe02g2333 Hepe-Chr2:67726739 7.73e-16 dispersed
Hepe02g2314 Hepe-Chr2:67126467 Hepe02g2333 Hepe-Chr2:67726739 2.60e-22 transposed
Hepe02g1817 Hepe-Chr2:27204815 Hepe02g2333 Hepe-Chr2:67726739 3.68e-29 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72585 PF00069 Pkinase 1.50E-68 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2333 K13414 - csv:101218538 870.152