Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2353 ATGGAGTCAAGGGGCCATTCCAATGGCGGAGAACTTGAAACAAAAGAGATGGACATTACAAGTCTTTCATCTTCACGCAACAATACTCAGTACATTCACAAGGTGGGGGTTCCCCCAAAGCAAAATCTCTTCAAAGAATTTAAAGCCACAGTGAAAGAGACTTTCTTTTCAGATGATCCTCTGCGAACGTTCAAAGATCAATCAAAGTCCCGAAAGTTGGTCCTGGGAATTCAGGCTATCTTCCCGATATTCGAATGGGGTAGGAATTACAATCTCACTAAATTTAGAGGAGATTTAATTGCTGGATTCACTATTGCAAGTCTGTGTATTCCACAGGATATAGGGTATGCAAAACTTGCTAATTTGGCTCCCCAGTATGGATTATACTCCAGTTTTGTACCACCACTGGTTTATGCTTTGATGGGTAGCTCAAGAGACATAGCGATTGGACCAGTGGCTGTTGTTTCTCTCTTGCTGGGAACACTTCTTCAAAAAGAGTTTGATTACCATACACATCCAGAAGAGTATCTGCGGCTTGCATTTACAGCTACTTTTTTTGCTGGAATCACTCAAGCCACACTAGGGATTCTAAGGTTGGGTTTTCTGATTGACTTTCTATCTCACGCTGCCATTGTTGGCTTTATGGGTGGAGCTGCCATCACTATTGCCCTTCAACAGCTTAAAGGCTTTCTTGGCATTAAAATTTTTACAAAGAAAACAGACATTGTCTCTGTAATGCGCTCAGTATTTGAGGCAGCGCATCATGGATGGAACTGGCAGACTATAGTCATTGGAGTATCTTTTCTTAGTTTTCTTCTAGTAGCCAAGTATATTGGAAAGAAGAAGAAGAGCCTTTTTTGGGTGCCTGCAATTGCTCCATTAATATCAGTTATTCTGTCCACCTTCTTTGTTTACATTACCCATGCAGACCAGAAAGGTGTCGCAATTGTGAAACACATAGAGAAAGGAATCAATCCCTCGTCAGTGAAGCAAATCTACTTCACTGGTGACAACCTTCTTAAAGGGTTCAGGATTGGCGTTGTGGCCGGTATGATAGCATTAACGGAAGCCATAGCAATTGGAAGAACATTTGCTTCCATGAAGGATTACCAGCTTGATGGTAACAAAGAAATGGTGGCACTAGGAACAATGAATGTTATTGGTTCAATGACTTCTTGCTATGTGGCAACAGGCTCGTTCTCTCGCTCAGCTGTGAATTACATGTCTGGCTGCCAAACTGCAGTCTCAAACATTGTTATGTCCTGTGTTGTATTTCTAACTCTAGAATTCATGACTCCCCTTTTCAAGTACACTCCAAATGCTATTCTCGCTGTCATCATTATCTCTGCTGTGATCAACTTGATCGACATTCAGGCAGCAATATTGCTTTGGAAGATTGATAAATTTGATTTTGTTGCTTGTTTGGGAGCCTTCTTCGGTGTGATTTTTGCAAGTGTTGAGATAGGCCTCCTAATTGCTGTTTCTATATCATTTGCTAAGATACTCTTACAAGTAACCAGGCCACGGGTTGCAGTACTCGGAAAGATCCCTAGGACGAGAGTATACAGAAACACCCAACAATATCCAGAAGCAACAAGGGTTCCAGGCATTCTAATTGTCAGAGTTGATTCTGCAATTTACTTTTCTAACTCCAATTACATCAAAGAGAGGATATTGAGATGGTTGGCAGATGAGGAAGAACAAATAACGAAGGCTTATTCAACAAAAACTCAGTTTTTGATTGTCGAGATGTCTCCTGTTACCGACATTGACACTAGTGGCATTCATGCCTTGGAAGAGCTATACAGGAATCTCCAGAAAAGAGACATTCAGCTTGTTCTAGCAAACCCCGGACCGATAGTGATCGACAAACTCCACGCATCCGATCTTGCTAATCTGATTGGTGAGGACCGTATCTTTCTAACGGTTGCTGAAGCTGTTTCATCCTGCTCCCCAAAATTGGTGGAAGAGGCCTAG 1977 41.83 MESRGHSNGGELETKEMDITSLSSSRNNTQYIHKVGVPPKQNLFKEFKATVKETFFSDDPLRTFKDQSKSRKLVLGIQAIFPIFEWGRNYNLTKFRGDLIAGFTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLVYALMGSSRDIAIGPVAVVSLLLGTLLQKEFDYHTHPEEYLRLAFTATFFAGITQATLGILRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKIFTKKTDIVSVMRSVFEAAHHGWNWQTIVIGVSFLSFLLVAKYIGKKKKSLFWVPAIAPLISVILSTFFVYITHADQKGVAIVKHIEKGINPSSVKQIYFTGDNLLKGFRIGVVAGMIALTEAIAIGRTFASMKDYQLDGNKEMVALGTMNVIGSMTSCYVATGSFSRSAVNYMSGCQTAVSNIVMSCVVFLTLEFMTPLFKYTPNAILAVIIISAVINLIDIQAAILLWKIDKFDFVACLGAFFGVIFASVEIGLLIAVSISFAKILLQVTRPRVAVLGKIPRTRVYRNTQQYPEATRVPGILIVRVDSAIYFSNSNYIKERILRWLADEEEQITKAYSTKTQFLIVEMSPVTDIDTSGIHALEELYRNLQKRDIQLVLANPGPIVIDKLHASDLANLIGEDRIFLTVAEAVSSCSPKLVEEA 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 68163732 68168666 - Hsped.02g23530.1 Hepe02g2353 563854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2353 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
Hepe02g2353 658 PANTHER SULFATE TRANSPORTER 56 650 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g2353 658 Pfam STAS domain 528 646 IPR002645 -
Hepe02g2353 658 FunFam Sulfate transporter 31 507 653 - -
Hepe02g2353 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Hepe02g2353 658 NCBIfam sulfate permease 82 646 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g2353 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Hepe02g2353 658 Gene3D STAS domain 507 653 IPR036513 -
Hepe02g2353 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Hepe02g2353 658 Pfam Sulfate permease family 95 475 IPR011547 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2353 Hepe-Chr2:68163732 Hepe03g2029 Hepe-Chr3:77628122 2.98e-244 dispersed
Hepe02g2353 Hepe-Chr2:68163732 Hepe02g2355 Hepe-Chr2:68300934 3.81e-213 proximal
Hepe02g0764 Hepe-Chr2:8401530 Hepe02g2353 Hepe-Chr2:68163732 5.81e-307 transposed
Hepe07g0650 Hepe-Chr7:7440220 Hepe02g2353 Hepe-Chr2:68163732 1.11e-212 transposed
Hepe01g2243 Hepe-Chr1:87090554 Hepe02g2353 Hepe-Chr2:68163732 6.63e-296 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2353 K17470 - csv:101212138 1197.96