Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2384 ATGGCCCTTGCAAATTCAGGTTTACAAGAAGAAGTGGATGGAATAATAATGAAGAGTAGCCATCATGAGAATCAAAATGGTAACTTTGTGTTTCGAAACACAACAAATTACCAACTTGATCATCAGCAACAAATAATGTCTCAGTCTCTCATCAATTTCAAATGTGGTATTGACAATATTTTCCACAAGAATAGCGAATCTTTGCTGAGCTTTGAGCCACAAGGTGTTTTTCAAGACACTAATTACAATTGGGAGCTGGATCAGCAACGTTTGGTGGACGATCCCAATTCCTTTCAAACAGCTACCTCCAATAATTACAGCCCTTCAAAAGACACTAAAAATGGAGATGGCTCTGTGTATGAATGGCTTTATTCTGAAGCAACAACTGTTGTTTCTGATGGTGTTCAACACGATGAACCAGCTCAAGAGATCGGCAATCAAAAACGATCCCATATGGGGGAGAGCAGTGGGGGTGTTTGTAAGAAGCAATGTACAGCTACTGCAGCTAATAAGAAACAGAAACCCAAATCATCAACAGCCAAGGATCCACAGAGCATTGCAGCCAAGAATCGACGTGAGAGGATTAGCGAGCGGCTGAAGTTACTGCAAGAATTGGTTCCCAATGGCTCCAAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGTTACGTCAAATTTCTTCAACTACAAGTGAAGATCCTAGCGACCGATGATTTTTGGCCGGTTCAAGGTGGGAAAGCTCCTGATATTTCCCAAGTTAAGGAAGCCATTGATGTCATTCTTTCATCTCAAAGAGAAAGAAGCTCAAGCTCAAACAGTGAAAAGTGA 831 41.03 MALANSGLQEEVDGIIMKSSHHENQNGNFVFRNTTNYQLDHQQQIMSQSLINFKCGIDNIFHKNSESLLSFEPQGVFQDTNYNWELDQQRLVDDPNSFQTATSNNYSPSKDTKNGDGSVYEWLYSEATTVVSDGVQHDEPAQEIGNQKRSHMGESSGGVCKKQCTATAANKKQKPKSSTAKDPQSIAAKNRRERISERLKLLQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDDFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 69148357 69151059 + Hsped.02g23840.1 Hepe02g2384 563885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2384 276 FunFam Transcription factor bHLH83 177 236 - -
Hepe02g2384 276 Pfam Helix-loop-helix DNA-binding domain 187 229 IPR011598 GO:0046983(InterPro)
Hepe02g2384 276 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 42 244 IPR045843 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g2384 276 MobiDBLite consensus disorder prediction 167 191 - -
Hepe02g2384 276 MobiDBLite consensus disorder prediction 167 185 - -
Hepe02g2384 276 MobiDBLite consensus disorder prediction 95 114 - -
Hepe02g2384 276 Gene3D - 172 236 IPR036638 GO:0046983(InterPro)
Hepe02g2384 276 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 177 237 IPR036638 GO:0046983(InterPro)
Hepe02g2384 276 CDD bHLH_AtIND_like 180 242 - -
Hepe02g2384 276 SMART finulus 185 234 IPR011598 GO:0046983(InterPro)
Hepe02g2384 276 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 228 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1823 Hepe-Chr1:83179898 Hepe02g2384 Hepe-Chr2:69148357 1.12e-16 dispersed
Hepe02g2384 Hepe-Chr2:69148357 Hepe07g0418 Hepe-Chr7:4351725 2.52e-20 dispersed
Hepe02g2384 Hepe-Chr2:69148357 Hepe02g0650 Hepe-Chr2:6822390 9.01e-21 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55087 PF00010 HLH 1.70E-07 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2384 - - - 0.0