Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2444 ATGAGTGGGACGATCGAGAATTACTTGAGAAGGAACTTCGAACTCGAGTCGAAGAGTCCGTCGGAGGAGGCTCAAATGCGATGGCGATCCGCCGTCTCTGTTGTCAAGAATCGTCGCCGGAGATTCCGTATGGTTGCTGATCTTGACAAGCGTGCTCAAGCTGGGGAGAAGCGCAAGAAACTCCAGGAAAAGATACGAGTTGCTCTATATGTACAAAAAGCAGCATTGCATTTCATTGATGCCGGGAAGCGCGGTGATTACAAGCTCTCGACAGAAGTAAGGGAAGCCGGTTTCGGAGTTGAACCTGATGTATTAGAATCCATTGTTCAAACCCACAACACCAAGACTTTGGAATATTATGGAGGCATTGGGGGATTGGGAAGAGAATTAAAAGTTTCTCTTAAAGATGGAATTGTTACAAGTGAAATACCTTCAAGGCAGAATATATATGGCATCAACCGTTATGTTGAGAAGCCTACAAGAGGCTTTTGGATGTTTGTATGGGAAGCCCTGCATGATTTGACTCTCATCATTCTCTTGGTTTCTGCTGTGGTTTCCATTGGTGTTGGACATGCGACTGAAGGTTGGCCAAAAGGCATGTACGATGGACTTGGAATAATACTAAGTATTCTTCTTGTCGTGATAGTAACTGCAGTCAGTGACTATAATCAGTCGATGCAATTTAAGGACTTGGAAAAGCAGAAGAAAAACATTTTTATTCAAGTCACAAGAGATGGATCCAGACAGAAGGTTTCCATTTATGACTTGGTGGTTGGGGATATTGTCCATTTGTCTATTGGAGATCAAGTCCCTGCTGATGGCCTTTTGGTGTCGGGCTATAGCTTGTCAATCGACGAATCGAGCTTGTCAGGTGAAAGTGAACCTGTAAATGTAAATGAAAAGAGGCCTTTTCTTCTTGCAGGGACCAAAGTGCAGGATGGGTCTGGTAAAATGCTAGTTGCCTCGGTTGGCATGAGAACCGAATGGGGAAGATTGATGGATACTTTGAGTGAAGGAGGAGACGACGAAACGCCACTTCAGGTAAAGCTTAATGGGGTTGCGACAATTATTGGAAAGATCGGGTTGGTTTTCGCGGTGTTAACGTTTTTAGTTCTGATCTCAAGGTATTTTGTGCATAAAGCATTAATCAATCAGATTGGGCACTGGTCCTCCAAAGATGCATCAACGCTTCTGAATTATTTTGCCATTGCTGTAATTATCATTGTTGTTGCAGTCCCTGAAGGATTGCCTCTAGCCGTGACACTAAGTCTCGCCTTTGCCATGAAAAGGTTAATGAAGGATAAGGCCCTCGTGAGACATCTCTCCGCATGTGAGACTATGGGTTCTGCAACCTGCATTTGCACTGATAAAACAGGTACATTAACAACAAATCATATGGTCGTTGATAAAATGTGGATCTGTGAAGAAACAAGGACAATAAAGAATTCTCACGACGAGGCTGCTTTGAAAAACTCCGTAACCAAAACGGTATACAATCTCCTCGTCCAATCAATATTTCAAAACACTAGTTCAGAGGTGGTCAAAGGAAAAGATGGGAAAAATTCTATTTTAGGTTCTCCAACTGAGACAGCACTGCTAGAATTTGGCTTGCTTTTGGGTGGTGCTTTTGGTTCATTGAATGATGAGTTCAATATCGTCAAAGTCGAGCCATTCAATTCAAATAGAAAGAAAATGTCGGTTCTTGTAGCTCTTCCTGGTGGCGGGTTTCGAGCATTCTGCAAGGGAGCATCCGAAATCATTTTATCTATGTGTGACAAGGTTCTCAATTCTAATGGAGAAGCATTGTCTCTTTCAAATGAAAATAGAACGAACATCTCGAATATCATTAATAGTTTTGCAAGCGACGCTCTTAGAACTCTATGTATTGCTTACAAGGATATTGTAGAAGTTTCTTCAGCACCAAATAGAATTCCTGATGATGAATTCACTTTAATAGCTGTTGTTGGGATTAAGGATCCTGTACGTCCAGGTGTGAAGGAGGCAGTTCAGGCTTGTTTGGCTGCAGGAATAACTGTAAGGATGGTAACTGGGGATAACATAAACACGGCTAAAGCTATAGCTAAAGAGTGTGGTATTTTGACAGTAGGTGGTTTGGCAATAGAAGGGCCAGAGTTCCGAAACAAGAGCCAAGATGAAATGGAGAAGTTAATACCGAAACTCCAGGTGATGGCTCGATCATCTCCTCTTGACAAGCATACGTTGGTAGGACAGTTGAGGAAAACGTTCAAAGAAGTGGTGGCTGTCACTGGTGATGGGACTAATGATGCTCCTGCTTTGCATGAGGCAGACATTGGATTGGCTATGGGTATTGCCGGAACAGAGGTTGCTAAAGAAAATGCCGACGTAGTGATAATGGATGATAATTTCACAACCATTGTAAATGTTGCGAGATGGGGACGTGCAGTTTACATCAACATTCAGAAGTTCGTACAGTTCCAGCTTACCGTCAACGTAGTGGCTCTCATGCTCAATTTTATATCAGCATGCGCTACAGGTTCTGCACCTCTGACAGCTGTTCAAATGTTATGGGTGAACCTGATCATGGACACGTTGGGAGCGCTGGCATTAGCCACGGAGCCACCCACGGACGGGCTAATGCAAAGAAAACCAATTGGGAGAAACGTTAATATAATCACTGGGATCATGTGGAGGAACATTATCGGTCAGAGCATTTATCAAATCACAGTGTTATTAATCCTCACATTCGAAGGAAAGCGCATCCTGAATCTCTCGGGACCGGATTCGAACATCGTCCTCAACACATTCATCTTCAACTCGTTCGTGTTTTGCCAAGTGTTTAATGAAATAAACAGCCGTGACATGGAGAAGATAAACGTATTCAAAGGGATGTTGGAGAGTTGGGTGTTCATTGGAGTGATGGGTTGCACAGTAGGGTTCCAAATCATAATAGTTGAATTTCTTGGGACATTTGCAGAAACAGTGGGATTGAGGTGGAGTTTGTGGGCAGCCAGCATCGTAATCGGAGCTCTAAGTTTGCCAATAGCAATGGCTCTCAAATGCATTCCTGTTGCTAATTGCAAAGCCACGGCTCAGTTCCACGATGGTTATGAACCACTCCCCACTGGTCCAGAGTTGGCTTGA 3123 43.39 MSGTIENYLRRNFELESKSPSEEAQMRWRSAVSVVKNRRRRFRMVADLDKRAQAGEKRKKLQEKIRVALYVQKAALHFIDAGKRGDYKLSTEVREAGFGVEPDVLESIVQTHNTKTLEYYGGIGGLGRELKVSLKDGIVTSEIPSRQNIYGINRYVEKPTRGFWMFVWEALHDLTLIILLVSAVVSIGVGHATEGWPKGMYDGLGIILSILLVVIVTAVSDYNQSMQFKDLEKQKKNIFIQVTRDGSRQKVSIYDLVVGDIVHLSIGDQVPADGLLVSGYSLSIDESSLSGESEPVNVNEKRPFLLAGTKVQDGSGKMLVASVGMRTEWGRLMDTLSEGGDDETPLQVKLNGVATIIGKIGLVFAVLTFLVLISRYFVHKALINQIGHWSSKDASTLLNYFAIAVIIIVVAVPEGLPLAVTLSLAFAMKRLMKDKALVRHLSACETMGSATCICTDKTGTLTTNHMVVDKMWICEETRTIKNSHDEAALKNSVTKTVYNLLVQSIFQNTSSEVVKGKDGKNSILGSPTETALLEFGLLLGGAFGSLNDEFNIVKVEPFNSNRKKMSVLVALPGGGFRAFCKGASEIILSMCDKVLNSNGEALSLSNENRTNISNIINSFASDALRTLCIAYKDIVEVSSAPNRIPDDEFTLIAVVGIKDPVRPGVKEAVQACLAAGITVRMVTGDNINTAKAIAKECGILTVGGLAIEGPEFRNKSQDEMEKLIPKLQVMARSSPLDKHTLVGQLRKTFKEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVVIMDDNFTTIVNVARWGRAVYINIQKFVQFQLTVNVVALMLNFISACATGSAPLTAVQMLWVNLIMDTLGALALATEPPTDGLMQRKPIGRNVNIITGIMWRNIIGQSIYQITVLLILTFEGKRILNLSGPDSNIVLNTFIFNSFVFCQVFNEINSRDMEKINVFKGMLESWVFIGVMGCTVGFQIIIVEFLGTFAETVGLRWSLWAASIVIGALSLPIAMALKCIPVANCKATAQFHDGYEPLPTGPELA 1040
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 70563807 70569570 - Hsped.02g24440.1 Hepe02g2444 563945
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2444 1040 SFLD p-type atpase 436 808 IPR044492 -
Hepe02g2444 1040 Gene3D - 451 801 IPR023214 -
Hepe02g2444 1040 PRINTS H+-transporting ATPase (proton pump) signature 612 630 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe02g2444 1040 PRINTS H+-transporting ATPase (proton pump) signature 756 772 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe02g2444 1040 PRINTS H+-transporting ATPase (proton pump) signature 788 813 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe02g2444 1040 FunFam Calcium-transporting ATPase 653 801 - -
Hepe02g2444 1040 Gene3D - 137 337 - -
Hepe02g2444 1040 NCBIfam calcium-translocating P-type ATPase, PMCA-type 111 1017 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Hepe02g2444 1040 Gene3D - 464 660 IPR023299 GO:0000166(InterPro)
Hepe02g2444 1040 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 665 IPR023299 GO:0000166(InterPro)
Hepe02g2444 1040 CDD P-type_ATPase_Ca_PMCA-like 146 889 - -
Hepe02g2444 1040 SFLD Haloacid Dehalogenase 436 808 - -
Hepe02g2444 1040 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Hepe02g2444 1040 PANTHER CATION TRANSPORTING ATPASE 83 1017 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Hepe02g2444 1040 Pfam E1-E2 ATPase 241 433 - -
Hepe02g2444 1040 FunFam Calcium-transporting ATPase 464 660 - -
Hepe02g2444 1040 FunFam Calcium-transporting ATPase 20 80 - -
Hepe02g2444 1040 Pfam Cation transporter/ATPase, N-terminus 120 186 IPR004014 -
Hepe02g2444 1040 SUPERFAMILY HAD-like 453 861 IPR036412 -
Hepe02g2444 1040 Pfam Cation transporting ATPase, C-terminus 841 1013 IPR006068 -
Hepe02g2444 1040 Gene3D - 20 81 - -
Hepe02g2444 1040 FunFam Calcium-transporting ATPase 217 337 - -
Hepe02g2444 1040 Pfam haloacid dehalogenase-like hydrolase 648 770 - -
Hepe02g2444 1040 Pfam Ca2+-ATPase N terminal autoinhibitory domain 10 53 IPR024750 GO:0005516(InterPro)
Hepe02g2444 1040 SMART Cation_ATPase_N_a_2 117 191 IPR004014 -
Hepe02g2444 1040 SUPERFAMILY Calcium ATPase, transmembrane domain M 119 1017 IPR023298 -
Hepe02g2444 1040 NCBIfam HAD-IC family P-type ATPase 206 518 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe02g2444 1040 NCBIfam HAD-IC family P-type ATPase 551 700 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe02g2444 1040 NCBIfam HAD-IC family P-type ATPase 726 839 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe02g2444 1040 Gene3D - 169 1014 - -
Hepe02g2444 1040 PRINTS P-type cation-transporting ATPase superfamily signature 756 775 - -
Hepe02g2444 1040 PRINTS P-type cation-transporting ATPase superfamily signature 780 792 - -
Hepe02g2444 1040 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Hepe02g2444 1040 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Hepe02g2444 1040 PRINTS P-type cation-transporting ATPase superfamily signature 653 664 - -
Hepe02g2444 1040 PRINTS P-type cation-transporting ATPase superfamily signature 675 685 - -
Hepe02g2444 1040 SUPERFAMILY Calcium ATPase, transduction domain A 239 335 IPR008250 -
Hepe02g2444 1040 FunFam Calcium-transporting ATPase 773 1019 - -
Hepe02g2444 1040 Pfam Cation transport ATPase (P-type) 514 594 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1829 Hepe-Chr1:83224216 Hepe02g2444 Hepe-Chr2:70563807 0.0 dispersed
Hepe02g2444 Hepe-Chr2:70563807 Hepe04g1321 Hepe-Chr4:68809405 0.0 dispersed
Hepe10g1434 Hepe-Chr10:51031666 Hepe02g2444 Hepe-Chr2:70563807 4.03e-12 dispersed
Hepe02g2444 Hepe-Chr2:70563807 Hepe05g0808 Hepe-Chr5:20694183 0.0 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2444 K01537 - csv:101203529 1805.42