Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2449 ATGTCTGGTTCCGATTGTGTCAACAACAACAATGGCGCCATAATCGAACTTCACCAAAACCAACTACAGAGCAATCAGACTAACAACAACAATGCTGCTCTGGTCCTCAAAAAACCCCCCTCCAAGGACCGCCACAGCAAGGTCGATGGCCGTGGCCGCCGTATTCGTATGCCCATCATTTGCGCCGCTCGCGTCTTCCAACTCACCCGCGAGTTGGGCCATAAATCCGACGGCCAAACCATCGAGTGGCTCCTCCGTCAAGCCGAGCCCTCCATTATCGCCGCCACCGGCACCGGCACCACTCCCGCCACCTTCTCCACCATCGCCGCCTCCCTCCGCGGCGCTTCCTCTTCCTCTCTCGACCACAAGCCACTTCTCGCTCCCGCCCCCTTCATTCTCGGCAAGCGCCTAAGAACCGACGACGACGGACCTAACAAAGACGACGCCGCCACTGCCGCCATTTCCGTTGGCCACACTCTCGGTTCCATTATGGGTCCGGCTGCTTCCGGTGGCTACTGGGCGATTCCGGCCAGACCGGATTTCGGCCAGGTCTGGAGCTTTGCCGCCGCGGCTCCGGAGATGGTTTCTCATCAAGCGTCTCTGTTCGTTCAGCAACAATCAATGGGAGAGGCGTCGGCCGCCAAAGTGGGAAATTACCTTCCGGGGCATCTCAATTTGCTGGCTTCTTTATCAGGTGGACCCGGAAGTTCCGGCCGGAGAGACAACGACCACCGTTGA 738 58.94 MSGSDCVNNNNGAIIELHQNQLQSNQTNNNNAALVLKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFSTIAASLRGASSSSLDHKPLLAPAPFILGKRLRTDDDGPNKDDAATAAISVGHTLGSIMGPAASGGYWAIPARPDFGQVWSFAAAAPEMVSHQASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 70711405 70712856 + Hsped.02g24490.1 Hepe02g2449 563950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2449 245 ProSiteProfiles TCP domain profile. 41 95 IPR017887 -
Hepe02g2449 245 Pfam TCP family transcription factor 41 119 IPR017887 -
Hepe02g2449 245 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 35 177 IPR005333 GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0042752(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2449 Hepe-Chr2:70711405 Hepe09g0125 Hepe-Chr9:998999 1.33e-34 dispersed
Hepe08g0907 Hepe-Chr8:8320332 Hepe02g2449 Hepe-Chr2:70711405 4.51e-26 transposed
Hepe01g0906 Hepe-Chr1:73300444 Hepe02g2449 Hepe-Chr2:70711405 2.36e-84 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55097 PF03634 TCP 4.70E-32 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2449 K16221 - csv:101214586 352.443