Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2485 ATGTCTTCTTCTCTTTCATGCTTCTTCTTCTTCTTCTTTTCCCTCTCCTTTACTCTTTCCGCTACCGGCGGCGAGGTTTCCGATGATGCAATGTCGCTCCTCAGCTTTAAGGCCTCCATTTCGCTCCATGGCTCTGATGTTCTTCGTGCCTGGAATTTGTCGATTTCTCACTGCGATTGGTTTGGAGTTACTTGCGATGGTGTTACTTCTAGAGTTGTCGCTCTGAATATCAGTGGAAGTAGTGGTACTATGGTGGCGGATTCTAGTCTGGCTGGGACGTTGAATCCGGCGATTGGAAATCTTACTGAGCTTCGCGTTTTGTCGCTTCCGAATAATCTGATCTACGGGGAGATTCCGGGGAGTGTTGGTAATCTTTGGTTGCTGGAGGTTCTTGAGCTTCAGGGGAACAATTTCTCTGGAGAGATTCCGAAACAGATAAGTTCACTTCGATCTCTTCGCCTGCTTAATTTCTCTGATAACTCGTTTTCTGGCTCGATACCGAGTAAATTGATTGGTTCGGCGAAATTAGAAGTAATTGATTTGTCGTACAATCAATTATCTGGTAGGATTCAAGTTGTTGATAATAGATGTGGCGTTTTGAATCATTTGAGGCTTTCGCATAACTTTCTGACTGGTAACATTCCGGCGGAGATTGGACAATGTTGGAAACTGAAGACTCTGTTGCTCGATGGTAATATATTAGAAGGTCAAATTCCGGCTGAGATCGGCCAAGTTTCAGAACTCAGAATTCTTGATGTTTCTAGGAATAGCCTTACTGATTCGATTCCGAAAGAGCTCGGTAATTGCTGGAAGTTGTCACAGATCGTGTTGACGAATTTGAATGATATCAATCCCGACGGCGATAGTTTAAGGGGGGAATTCAACGCTTTCAATGGAGGTATTCCTTCTGAATTGCTGTTGCTTCCAAGTCTGCAAGTTTTTTGGGCACCGAGAGGCAATTTTAATGGCAAATTGCCGAATAATTGGAGTTCTTCATGCTCCCTTAGAGTTCTTAATTTAGGGCAAAATTACATCACTGGTACTGTGCCCGAATCGATTGAGAAATGTGTGAATCTAACTTACATGGATTTATCTTCAAACAAGCTACAAGGTAACCTCCGTATGCAGCTTCGAATTTCATGTATGGTGTACTTCAATGTTAGCCAGAACAAAATTTCTGGTGTTCTTCCCAGATTTGAGAAAGACAGTTTCTGTACGAACATGATTCCGCCGCATGAACCAGCTCCCAGCGTCTTAGATGAGGAAGATGATTGGAATTCTTACTTCAATTTTCCTGTTTGGGATTTCCTGAGATTAAATGATTATCTTATAATCGCCCATGATTTTAGCTGGAATAGGTTCAGTGGCTCATTAACTTCATTCAAAGTGGGAGAAGAACTTTTGACTAATGGTCGCAAGTTCTCATACAAACTGTTGCTTAATAGCAATCAGTTCAATGGATCACTTCCCGTTGATTTGGTCTCGAACTGTAATGATATGAAGAGCGTTTCGGTTAACTTGAGTTCAAACTTAGTATCAGGTGAGATTTCTGATGCATTTTTTCTCCATTGTCGACAGATGATGGAGTTTGAGGCAGCAAGCAATGAATTAGATAACTCGATTGGACCTGGAATTGGCGACTTGCAGATGCTTCTTCGTCTCGACTTGAGAGGGAATAGGTTGTCCGGAGTTTTACCAGATCAGTTGGGGAACTTGCAGCGTTTGAAATGGATGCTTTTGGGCGGAAACAATTTGACTGGAGAGATTCCATCTCGTCGATTGTCTTCTCTCATGAGTTTAGATCTTTCTCGCAACAGATTTACAGGAGTGATCCCTGAAAGTTTGGCATATGCTTCAAGACTTGAGATTCTGTTGCTTGATCATAACAGGTTAACTGGGGAAATACCAGCATCTTTCTCTGCCCTTTCTCATCTCACTAAATTGGATGTCTCTTTTAACAACCTTTCTGGCCACATTCCTCATCTTCAGCACATGATTGACTGCATTTACTTTGGTGGGAATAAGTTTCTGCATCAATGTCCGGATTCATACTCCGAGTCCCCAGCTGGACTTCCAGTTCCTCTCGACGTTGAGAAGTGGAAGAGACGAAGAAAGTTTGTGTCCATGATAATTGCTGTGGCTGCTTCCTCAACTCTAATTTGCATACTCATAATGATAGCCGTTATCATCATTGTGAAGAAAAAGCTTGGTAGACAAAATAGGTTAAAGAAGAAACAAGTGGTGACTTTCTCAGATGCTCCTTCCGATCTGAATTATGATAATGTGGTCCGAGCTACCGAAAGTTTCAGCCTTCGCTACCTAATCGGTACTGGTGGCTTTGGGTCAACATACAAGGCTGAACTGCCCTCAGGTTTTCTGGTTGCTGTAAAGAGACTGTCCATTGGTAGGTTTCAAGGAGGCATTCAACAATTCGACGCAGAGATTCGAACATTGGGAAGAATACGACACAAAAACCTCGTAACTCTTCTTGGGTACTATGTCGGAGAGGCTGAAATGTTCTTAGTTTACAACTATCTTTCCGGTGGGAACCTTGAGAACTTCATTCATGAAAAATCTTGCAAACACGTAAAGCACTCGGTGATTCGCAACATCGCTTTGGACATAGCGAGGGCTCTTGCATACCTTCATTATTCCTGTGATCCTAGGATTGTTCATAGAGACATCAAGCCTAGTAATATCCTTCTTGATGAAGATCACAACACCTACATATCAGATTTTGGGTTGGCCAGGCTTCTTGAGGTTTCAGAGACTCATGCCACAACAGATGTGGCAGGAACATTTGGATATGTTGCACCAGAATATGCTACAACTTGCAGGGTCTCGGACAAGGTCGATGTCTATAGCTTTGGAGTTGTGCTCTTAGAGTTGCTTTCTGGAAAAAGGTCGCTCGATCGATCCTTTTCCGACTTTGGGAACGGGTTCAACATTGTTACATGGGCAAAGATGCTGATCAAGGAAGGTCGTTCTTCTGAGCTTTTCACTCCTACACTTTGGGAAATGGGACCAAAGGAACAATTACTTGGAATGTTAAAGCTCGCGTCTAATTGCACAGTTGAAACTTTCGCTCTTCGACCATTGATGAAGCAGGTCGTCGAGACGCTGAAACAGTTGTAA 3135 42.78 MSSSLSCFFFFFFSLSFTLSATGGEVSDDAMSLLSFKASISLHGSDVLRAWNLSISHCDWFGVTCDGVTSRVVALNISGSSGTMVADSSLAGTLNPAIGNLTELRVLSLPNNLIYGEIPGSVGNLWLLEVLELQGNNFSGEIPKQISSLRSLRLLNFSDNSFSGSIPSKLIGSAKLEVIDLSYNQLSGRIQVVDNRCGVLNHLRLSHNFLTGNIPAEIGQCWKLKTLLLDGNILEGQIPAEIGQVSELRILDVSRNSLTDSIPKELGNCWKLSQIVLTNLNDINPDGDSLRGEFNAFNGGIPSELLLLPSLQVFWAPRGNFNGKLPNNWSSSCSLRVLNLGQNYITGTVPESIEKCVNLTYMDLSSNKLQGNLRMQLRISCMVYFNVSQNKISGVLPRFEKDSFCTNMIPPHEPAPSVLDEEDDWNSYFNFPVWDFLRLNDYLIIAHDFSWNRFSGSLTSFKVGEELLTNGRKFSYKLLLNSNQFNGSLPVDLVSNCNDMKSVSVNLSSNLVSGEISDAFFLHCRQMMEFEAASNELDNSIGPGIGDLQMLLRLDLRGNRLSGVLPDQLGNLQRLKWMLLGGNNLTGEIPSRRLSSLMSLDLSRNRFTGVIPESLAYASRLEILLLDHNRLTGEIPASFSALSHLTKLDVSFNNLSGHIPHLQHMIDCIYFGGNKFLHQCPDSYSESPAGLPVPLDVEKWKRRRKFVSMIIAVAASSTLICILIMIAVIIIVKKKLGRQNRLKKKQVVTFSDAPSDLNYDNVVRATESFSLRYLIGTGGFGSTYKAELPSGFLVAVKRLSIGRFQGGIQQFDAEIRTLGRIRHKNLVTLLGYYVGEAEMFLVYNYLSGGNLENFIHEKSCKHVKHSVIRNIALDIARALAYLHYSCDPRIVHRDIKPSNILLDEDHNTYISDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKVDVYSFGVVLLELLSGKRSLDRSFSDFGNGFNIVTWAKMLIKEGRSSELFTPTLWEMGPKEQLLGMLKLASNCTVETFALRPLMKQVVETLKQL 1044
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 71389676 71393598 + Hsped.02g24850.1 Hepe02g2485 563986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2485 1044 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g2485 1044 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 1043 IPR050647 -
Hepe02g2485 1044 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 445 687 - -
Hepe02g2485 1044 SMART serkin_6 769 1044 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2485 1044 SUPERFAMILY Protein kinase-like (PK-like) 746 1041 IPR011009 -
Hepe02g2485 1044 Pfam Protein kinase domain 774 972 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2485 1044 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 846 1044 - -
Hepe02g2485 1044 Pfam Leucine rich repeat 596 655 IPR001611 GO:0005515(InterPro)
Hepe02g2485 1044 FunFam Leucine-rich repeat receptor-like protein kinase 26 192 - -
Hepe02g2485 1044 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Hepe02g2485 1044 Gene3D Ribonuclease Inhibitor 197 290 IPR032675 -
Hepe02g2485 1044 Gene3D Ribonuclease Inhibitor 291 411 IPR032675 -
Hepe02g2485 1044 SUPERFAMILY L domain-like 27 280 - -
Hepe02g2485 1044 Gene3D Ribonuclease Inhibitor 426 691 IPR032675 -
Hepe02g2485 1044 SMART LRR_typ_2 245 269 IPR003591 -
Hepe02g2485 1044 SMART LRR_typ_2 548 571 IPR003591 -
Hepe02g2485 1044 SMART LRR_typ_2 642 664 IPR003591 -
Hepe02g2485 1044 SMART LRR_typ_2 101 125 IPR003591 -
Hepe02g2485 1044 SMART LRR_typ_2 594 617 IPR003591 -
Hepe02g2485 1044 SMART LRR_typ_2 149 173 IPR003591 -
Hepe02g2485 1044 Gene3D Ribonuclease Inhibitor 28 196 IPR032675 -
Hepe02g2485 1044 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 195 284 - -
Hepe02g2485 1044 Pfam Leucine Rich Repeat 248 269 IPR001611 GO:0005515(InterPro)
Hepe02g2485 1044 Pfam Leucine Rich Repeat 200 221 IPR001611 GO:0005515(InterPro)
Hepe02g2485 1044 Pfam Leucine Rich Repeat 128 149 IPR001611 GO:0005515(InterPro)
Hepe02g2485 1044 Pfam Leucine Rich Repeat 151 169 IPR001611 GO:0005515(InterPro)
Hepe02g2485 1044 Pfam Leucine Rich Repeat 334 356 IPR001611 GO:0005515(InterPro)
Hepe02g2485 1044 Pfam Leucine Rich Repeat 551 572 IPR001611 GO:0005515(InterPro)
Hepe02g2485 1044 CDD STKc_IRAK 775 1044 - -
Hepe02g2485 1044 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 733 845 - -
Hepe02g2485 1044 Gene3D Phosphorylase Kinase; domain 1 730 845 - -
Hepe02g2485 1044 SUPERFAMILY L domain-like 296 667 - -
Hepe02g2485 1044 ProSitePatterns Protein kinases ATP-binding region signature. 775 797 IPR017441 GO:0005524(InterPro)
Hepe02g2485 1044 ProSiteProfiles Protein kinase domain profile. 769 1044 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2485 1044 Gene3D Transferase(Phosphotransferase) domain 1 846 1044 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0890 Hepe-Chr2:10655303 Hepe02g2485 Hepe-Chr2:71389676 2.15e-127 dispersed
Hepe02g2485 Hepe-Chr2:71389676 Hepe10g1850 Hepe-Chr10:55220573 3.44e-62 dispersed
Hepe02g2485 Hepe-Chr2:71389676 Hepe07g1016 Hepe-Chr7:14323610 9.99e-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72590 PF00069 Pkinase 2.90E-45 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2485 - - - 0.0