Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2492 ATGGCGCTCTCTGATAAATCCTCTCGCCAATCGCTGATCCCCAGCTTCCTCTATTCTTCCCCTTCTTCCACTCGCACCCTTCCCCTCAAGAAGATGCTTCAGTCTTCTCCACCCAGTGTTGTTGATTCTGTTTCCTCTTCTCCTAAGAGCTTTGTTATTCCCGCCCCGACCGAGCCGTCTAGGAAGATCGAGATGTACTCGCCGGCGTTCTACGGTGCTTGTACTGTTGGTGGAATTCTCAGCTGTGGTCTCACGCATATGACTGTTACTCCTCTCGATTTGGTTAAATGCAATATGCAGATTGACCCTGCGAAATACAAAAGTATTTCGTCTGGTTTTGGAGTTTTGCTTAAGGAGCAGGGTGTGAAGGGGTTCTTTAGGGGTTGGGTGCCTACCCTCCTTGGATACAGTGCACAGGGTGCCTGCAAGTTTGGTTTCTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCAGCTAAGTACAAGACCTTGATCTACCTTGCTGGTTCTGCATCTGCTGAGGTGATTGCTGATGTTGCACTTTGCCCTTTCGAAGCAGTGAAGGTTCGGGTTCAAACTCAGCCTGGTTTTGCTAGAGGGCTAGCAGATGGTCTTCCCAAGTTTGTCAAATCTGAAGGAACTCTAGGGTTGTACAAGGGTATAGTTCCACTCTGGGGACGCCAGATTCCATACACAATGATGAAGTTTGCATCCTTCGAGACTATAGTTGAGATGATATACAAGTATGCCATTCCCAGACCAAAGGATCAGTGCACCAAATCTCTCCAGCTTGGAGTTAGTTTTGCTGGTGGATATGTGGCTGGTGTTTTATGTGCTATCGTGTCTCATCCTGCCGATAATCTTGTGTCATTCCTCAACAATGCCAAAGGAGCAACTGTTGGTGATGCTGTCAAGAAGATTGGAGTAGTGGGTCTCTTCACCCGTGGTCTACCCCTCCGTATCGTTATGATTGGAACTCTTACTGGTGCTCAGTGGGGTCTTTATGATGCATTCAAAGTATTTGTTGGACTGCCTACTACTGGTGGTGTTTCTCCTGCTGCCCCCGCACTTGCTGCTGCTGAGGTCTCAAAGGCATGA 1113 47.89 MALSDKSSRQSLIPSFLYSSPSSTRTLPLKKMLQSSPPSVVDSVSSSPKSFVIPAPTEPSRKIEMYSPAFYGACTVGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKYAIPRPKDQCTKSLQLGVSFAGGYVAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGVVGLFTRGLPLRIVMIGTLTGAQWGLYDAFKVFVGLPTTGGVSPAAPALAAAEVSKA 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 71495839 71499958 + Hsped.02g24920.1 Hepe02g2492 563993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2492 370 SUPERFAMILY Mitochondrial carrier 74 342 IPR023395 -
Hepe02g2492 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 69 153 IPR018108 -
Hepe02g2492 370 Gene3D Mitochondrial carrier domain 73 347 IPR023395 -
Hepe02g2492 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 267 346 IPR018108 -
Hepe02g2492 370 FunFam Phosphate carrier protein, mitochondrial 69 347 - -
Hepe02g2492 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 166 250 IPR018108 -
Hepe02g2492 370 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 51 356 IPR044677 GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Hepe02g2492 370 Pfam Mitochondrial carrier protein 167 253 IPR018108 -
Hepe02g2492 370 Pfam Mitochondrial carrier protein 72 156 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2492 Hepe-Chr2:71495839 Hepe07g1390 Hepe-Chr7:45852904 4.07e-17 dispersed
Hepe02g0359 Hepe-Chr2:3367072 Hepe02g2492 Hepe-Chr2:71495839 3.02e-108 transposed
Hepe02g1660 Hepe-Chr2:22470011 Hepe02g2492 Hepe-Chr2:71495839 1.58e-204 transposed
Hepe02g2492 Hepe-Chr2:71495839 Hepe07g1011 Hepe-Chr7:14272084 1.05e-22 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2492 K15102 - csv:101221771 649.818