Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2501 ATGCCAGACGTGCAAGCCCTTGTTAATGATTTCGTTATCAAGCTTAAGAAGCGTAAAATTGAGGGCTCCTTGGCCACCGCAAAGCATACGGCTGAATTGCTTCGTTCTGTCATTTCGCAGCAGCGAATACCCTACACGAATCAGGCGGCTGCATTGATTGATGCTGTGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGAGCTTGCTGTGGGTAATATTGTGAGGCGTGTTTTGCACATTATTAGAGAGGAGAATCTTTCTCTCACCACAGCTTCTATTGCTGGGTTGAGCCTAGCAGCAGTTAGTGATGATGAAGATGACAGTGGAAAAGATGATCGCCCTGCCCTTTCAGCCGCTGCTGTTGCAGCTGCTGCAAGAAGCACTTTGCGGCCGCCTTCCTTGCAAACTCTTCTCGAGGATGTTCCCAACCAAACATCTGTTCATCATACTTCATCGTCTGGAGGTGATTCAGAAGGAAAAAGCAAATCTGCTGATAAAAATTCGAGGAGTCGGAAACTCAAGCATGATGTAATTGAAGCTGTTAATGAACTTATTCAGGATATTGCAACTTGTCATGAACAGATTGCTGAGCAAGCAGTGGAGCACATCCATCAAAACGAGGTAATATTAACTCTGGGGAGTTCCAGAACAGTATTAGAATTTCTTTGTGCTGCTAAGGAGAAGAAAAGGTCCTTCCGGGTGTTTGTTGCTGAGGGTGCTCCAAGATATCAGGGTCATCTTCTTGCTAAGGAGTTGGTTACAAGAGGTTTACAGACCACACTTATTACTGATTCTGCAGTTTTTGCTATGATCTCCCGGGTGAATATGGTAATAGTTGGAGCTCATGCTGTCATGGCAAATGGTGGTGTCATGGCACCTGTCGGATTGAATATGTTGGCCCTTGCAGCTAAAAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGAAGTCACAAGTTATGCCCTTTGTATCCTCACAATCCTGAAGTGCTACTCAATGAACTGAGATCCCCATCAGAGCTACTGGACTTTGGTGAATTTTCAGATTGCATGGACTTTGGAACTAACACCGGGTCTCCTCTTCTCCATGTAGTCAACCCTACATTTGACTATGTGCCACCATCACTTGTTAGTTTATTTGTTACTGACACGGGTGGCCATAACTCATCATACATGTATCGGCTTATAGCTGATTATTATTCAGCTGATGATTTGGATATTAAAAGAAGGCCTTCTACAGGGAGCTGA 1254 44.74 MPDVQALVNDFVIKLKKRKIEGSLATAKHTAELLRSVISQQRIPYTNQAAALIDAVKAVGEQLIAANPVELAVGNIVRRVLHIIREENLSLTTASIAGLSLAAVSDDEDDSGKDDRPALSAAAVAAAARSTLRPPSLQTLLEDVPNQTSVHHTSSSGGDSEGKSKSADKNSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVAEGAPRYQGHLLAKELVTRGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVMAPVGLNMLALAAKRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFGTNTGSPLLHVVNPTFDYVPPSLVSLFVTDTGGHNSSYMYRLIADYYSADDLDIKRRPSTGS 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 71607141 71620343 - Hsped.02g25010.1 Hepe02g2501 564002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2501 417 Pfam Initiation factor 2 subunit family 19 389 IPR000649 GO:0044237(InterPro)
Hepe02g2501 417 MobiDBLite consensus disorder prediction 143 176 - -
Hepe02g2501 417 MobiDBLite consensus disorder prediction 162 176 - -
Hepe02g2501 417 Gene3D - 194 401 IPR042529 -
Hepe02g2501 417 MobiDBLite consensus disorder prediction 143 161 - -
Hepe02g2501 417 FunFam translation initiation factor eIF-2B subunit beta 194 402 - -
Hepe02g2501 417 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 406 IPR037171 -
Hepe02g2501 417 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 3 407 IPR051855 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2501 K03754 - csv:101220366 743.421