Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2513 ATGGGCAAGAAGAAGGGCTGGTTTTATTTAGTCAAGAAGCTATTTGTTTCAGAGACACAGCCAAAGCCTGAGAAGAAGGAAAAGAGATGGAAATGGGTATTTGGAAGGATGAAGAACAAGAGATTAGCCACACTGACAGCGCCATTGCCATCGCCATCAAAGGCGATGACGAGACGAGAGGAGGAAGAGGAGAGGAAGCAGGCTTTTTCTGTGGCCCTTGCGAGTACCGCGGCGGCCGAAGCGGCGGTTGCAGCTGCTAAGGCTGCTGTTGAGGTTGTGTGGCTCACAGGGACCCCTCAATCTCATCAACAAGAGGCTGCAGCTCTCAAGAAGGCCCCTCCATCTGATCTCCATAAACGTGAAAGGGAAATCTATGAGTTTGCTGCTATTATTATCCAAACTGCTTTCCGTGGCTTCCTTGCAAGGAAAGCATTGAGAGCACTGAAAGGAATAGTGAGGCTACAGGCAATTATCAGAGGGAGAGCTGTTAGGCGACAAGCCATTGCCACTTTGAAGTGCTTGCAGTCCATCGTTAGCATACAATCACAGGTCTGTTCAAATCGACTTCATCGCCCTCAAAACACTTTCGATTCTCCTGAAACCAAGCAGTTGCAGAGCTTGAAAGATAAGATTATAAGGTTGGATTCGGATGGACAAAGGTGGGATGATAGCCTATTATCAAAGGAAGAAGCCGATGCAGTGTTTTTGAGCAGGAAAGAGGCAGTGATCAGGAGAGAGCGAGTCAAGGAGTACTTGTTCGCCCACAGGAGATCTGCAGAATCAGAACGAAAGAAAGTAAGAGGAAGATGGAGATACTGGCTAGACCAATGGGTCGACACCCAACTCTCCAAAAGCAAAGAACTCGAAGATTTGGACTCAATTTTCACCTCAAATCCAAAACACAAAGAGACAGAAGAAGGATTCAAACCAAACCCAACAACAACAAAAAACATGAACAGAATCACAGAACTCCCAAACCAATCTCCATCTCATAAACCAACTCTGAAAAACCTCTCTCACCACAAGAAGCAACGTTCATTGGGTGGAGGAACAACAATAGACTTAAACACCTCATTTTCAAGCTCCCCATTGGCTCCAACATACATGGCAGCCACAGAATCAGCCAAGGCAAAAGCAAAGTCGTTGAGCTCGCCAAAGCTGAGGCCAGCAGGGGCGTTGGACACGTGTTCCGATGGGAATTCGCCATGTAAGACAAAACAGCTCTGTTTGGTGTCATCAATGGCGAGTGAAGTGGGAATTAGCAGTGGGAGAAGGGGATTTCTGCAGCAGAGATCACCAGGGCTGAAGGGGCTTCCAGGACCTACAAGATCAAGCAGAACTCTCATCAACACCAAGGATTTGAGCATTGATTCTGAGCATTCCTTGCCAAACTGGGATAGACAAAGTGCTTTCCAATGA 1419 47.08 MGKKKGWFYLVKKLFVSETQPKPEKKEKRWKWVFGRMKNKRLATLTAPLPSPSKAMTRREEEEERKQAFSVALASTAAAEAAVAAAKAAVEVVWLTGTPQSHQQEAAALKKAPPSDLHKREREIYEFAAIIIQTAFRGFLARKALRALKGIVRLQAIIRGRAVRRQAIATLKCLQSIVSIQSQVCSNRLHRPQNTFDSPETKQLQSLKDKIIRLDSDGQRWDDSLLSKEEADAVFLSRKEAVIRRERVKEYLFAHRRSAESERKKVRGRWRYWLDQWVDTQLSKSKELEDLDSIFTSNPKHKETEEGFKPNPTTTKNMNRITELPNQSPSHKPTLKNLSHHKKQRSLGGGTTIDLNTSFSSSPLAPTYMAATESAKAKAKSLSSPKLRPAGALDTCSDGNSPCKTKQLCLVSSMASEVGISSGRRGFLQQRSPGLKGLPGPTRSSRTLINTKDLSIDSEHSLPNWDRQSAFQ 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 71787831 71791247 - Hsped.02g25130.1 Hepe02g2513 564014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2513 472 Pfam Protein of unknown function (DUF4005) 353 423 IPR025064 -
Hepe02g2513 472 PANTHER IQ-DOMAIN 5-RELATED 11 401 - -
Hepe02g2513 472 Pfam IQ calmodulin-binding motif 128 146 IPR000048 GO:0005515(InterPro)
Hepe02g2513 472 MobiDBLite consensus disorder prediction 310 334 - -
Hepe02g2513 472 MobiDBLite consensus disorder prediction 298 354 - -
Hepe02g2513 472 MobiDBLite consensus disorder prediction 443 472 - -
Hepe02g2513 472 ProSiteProfiles IQ motif profile. 125 153 - -
Hepe02g2513 472 MobiDBLite consensus disorder prediction 424 472 - -
Hepe02g2513 472 Gene3D - 124 176 - -
Hepe02g2513 472 MobiDBLite consensus disorder prediction 378 397 - -
Hepe02g2513 472 ProSiteProfiles IQ motif profile. 149 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2513 Hepe-Chr2:71787831 Hepe04g0914 Hepe-Chr4:63416213 3.79e-22 dispersed
Hepe02g2513 Hepe-Chr2:71787831 Hepe02g2982 Hepe-Chr2:79044009 3.45e-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2513 - - - 0.0