Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g2525 | ATGGTAGGGCCGGGGTCGGGTAGCCGGGGTCGGGAGGTCGGGCTGGGCGGCAGTGGCTGGGGTCGGGGTCGAGGTCGGGGTCAGGTGGTCGGATCAGGTGGTCGGGTGGCCGGGTCCGAGCCGGCGGTGGTAGGGTCGGGGTCGGGTAGCTGGGGTGGCGGGGGTCGGGGTCGGGTGGCAAGGGGTAAGGGTCGGGGTTGGGTGACCGGGGCGTCGGGGGTCTGGTGGCTGGGGTCGAGGCAGCGAGGGTTGGGTGGCCTGGCAGGGGCGGCGGTGGTCGGGGTCGGGGGGTCGAAGCGGGGCGGCGATGGCGGTGGTGGTCTGGGTCGGCGGTGGCCCGGTAGAGTGGCGACGGTGGCCTGGATCGGGTGGCAGTGGTGGTGGTTGGGGTCGGGTGGCAGCGGCAGTGGTCGGGGTCGGGTGGTGGCGGTGGCCGGGGTTGAGTGGCGGCGGCGGCGGTGGTTGGGGTCGGTCGGTCTGAGTGGGGCGACAGATGGATGGAGTGGGGAGGCGGTGGCCTACGACGGGTGGCCGAAGTTGGGCGATGGTGGTCGGCGGCGATCGGAGATGGTCGGTGAGGGGCGGCGTTGGTCGAAGGAGCTAGCTATGGTTGTTGCTGTTGAAACCACTCAGTTCCATGTTCTTGCTGTTGATGATAGCTTCATCGATCGGAAAGTCATCGAACGCCTCCTCAAAACCTCTTCCTATCATGTTACTGCTGTTGATTCTGGTACCAAAGCCTTGGAATTTCTTGGTCTTGTTGAAGATCATGATGAAACAAACTCCGAAATCGTCCCTTCGAATCATCATCAAGAAGTGGATGTGAATTTGATCATCACCGATTACAGTATGCCTGGAATGAGTGGCTACGATCTCCTCAGGAAGATCAAGGAATCGAAATCTCTTAAAGACATACCAGTTGTGATTATGTCATCTGAGAATGTTCCTTCGAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAATTCTTCCTCAAACCAGTTCAATTGTCTGATGTCAGGAAATTGAGACCTCATTTGATTAAAGAAAAATCCAGAATGAATTCATGA | 1071 | 59.38 | MVGPGSGSRGREVGLGGSGWGRGRGRGQVVGSGGRVAGSEPAVVGSGSGSWGGGGRGRVARGKGRGWVTGASGVWWLGSRQRGLGGLAGAAVVGVGGSKRGGDGGGGLGRRWPGRVATVAWIGWQWWWLGSGGSGSGRGRVVAVAGVEWRRRRWLGSVGLSGATDGWSGEAVAYDGWPKLGDGGRRRSEMVGEGRRWSKELAMVVAVETTQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGTKALEFLGLVEDHDETNSEIVPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSRMNS | 356 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 71971938 | 71979679 | - | Hsped.02g25250.1 | Hepe02g2525 | 564026 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g2525 | 356 | Pfam | Response regulator receiver domain | 214 | 341 | IPR001789 | GO:0000160(InterPro) | |
Hepe02g2525 | 356 | Gene3D | - | 213 | 355 | - | - | |
Hepe02g2525 | 356 | SMART | REC_2 | 212 | 344 | IPR001789 | GO:0000160(InterPro) | |
Hepe02g2525 | 356 | MobiDBLite | consensus disorder prediction | 1 | 64 | - | - | |
Hepe02g2525 | 356 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 209 | 352 | IPR045279 | GO:0009736(InterPro) | |
Hepe02g2525 | 356 | CDD | REC_typeA_ARR | 214 | 343 | - | - | |
Hepe02g2525 | 356 | SUPERFAMILY | CheY-like | 211 | 343 | IPR011006 | - | |
Hepe02g2525 | 356 | ProSiteProfiles | Response regulatory domain profile. | 213 | 348 | IPR001789 | GO:0000160(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g0637 | Hepe-Chr1:68251939 | Hepe02g2525 | Hepe-Chr2:71971938 | 8.91e-50 | dispersed | |
Hepe01g0986 | Hepe-Chr1:74485700 | Hepe02g2525 | Hepe-Chr2:71971938 | 9.39e-67 | dispersed | |
Hepe01g2292 | Hepe-Chr1:87499798 | Hepe02g2525 | Hepe-Chr2:71971938 | 3.17e-48 | dispersed | |
Hepe02g2242 | Hepe-Chr2:63796930 | Hepe02g2525 | Hepe-Chr2:71971938 | 1.90e-54 | dispersed | |
Hepe02g2525 | Hepe-Chr2:71971938 | Hepe04g0485 | Hepe-Chr4:56344491 | 8.80e-64 | dispersed | |
Hepe02g2525 | Hepe-Chr2:71971938 | Hepe05g0710 | Hepe-Chr5:12677465 | 1.35e-67 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55104 | PF00072 | Response_reg | 4.80E-20 | CL0304 | Hepe | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g2525 | K14492 | - | csv:101210839 | 266.929 |