Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2525 ATGGTAGGGCCGGGGTCGGGTAGCCGGGGTCGGGAGGTCGGGCTGGGCGGCAGTGGCTGGGGTCGGGGTCGAGGTCGGGGTCAGGTGGTCGGATCAGGTGGTCGGGTGGCCGGGTCCGAGCCGGCGGTGGTAGGGTCGGGGTCGGGTAGCTGGGGTGGCGGGGGTCGGGGTCGGGTGGCAAGGGGTAAGGGTCGGGGTTGGGTGACCGGGGCGTCGGGGGTCTGGTGGCTGGGGTCGAGGCAGCGAGGGTTGGGTGGCCTGGCAGGGGCGGCGGTGGTCGGGGTCGGGGGGTCGAAGCGGGGCGGCGATGGCGGTGGTGGTCTGGGTCGGCGGTGGCCCGGTAGAGTGGCGACGGTGGCCTGGATCGGGTGGCAGTGGTGGTGGTTGGGGTCGGGTGGCAGCGGCAGTGGTCGGGGTCGGGTGGTGGCGGTGGCCGGGGTTGAGTGGCGGCGGCGGCGGTGGTTGGGGTCGGTCGGTCTGAGTGGGGCGACAGATGGATGGAGTGGGGAGGCGGTGGCCTACGACGGGTGGCCGAAGTTGGGCGATGGTGGTCGGCGGCGATCGGAGATGGTCGGTGAGGGGCGGCGTTGGTCGAAGGAGCTAGCTATGGTTGTTGCTGTTGAAACCACTCAGTTCCATGTTCTTGCTGTTGATGATAGCTTCATCGATCGGAAAGTCATCGAACGCCTCCTCAAAACCTCTTCCTATCATGTTACTGCTGTTGATTCTGGTACCAAAGCCTTGGAATTTCTTGGTCTTGTTGAAGATCATGATGAAACAAACTCCGAAATCGTCCCTTCGAATCATCATCAAGAAGTGGATGTGAATTTGATCATCACCGATTACAGTATGCCTGGAATGAGTGGCTACGATCTCCTCAGGAAGATCAAGGAATCGAAATCTCTTAAAGACATACCAGTTGTGATTATGTCATCTGAGAATGTTCCTTCGAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAATTCTTCCTCAAACCAGTTCAATTGTCTGATGTCAGGAAATTGAGACCTCATTTGATTAAAGAAAAATCCAGAATGAATTCATGA 1071 59.38 MVGPGSGSRGREVGLGGSGWGRGRGRGQVVGSGGRVAGSEPAVVGSGSGSWGGGGRGRVARGKGRGWVTGASGVWWLGSRQRGLGGLAGAAVVGVGGSKRGGDGGGGLGRRWPGRVATVAWIGWQWWWLGSGGSGSGRGRVVAVAGVEWRRRRWLGSVGLSGATDGWSGEAVAYDGWPKLGDGGRRRSEMVGEGRRWSKELAMVVAVETTQFHVLAVDDSFIDRKVIERLLKTSSYHVTAVDSGTKALEFLGLVEDHDETNSEIVPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSRMNS 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 71971938 71979679 - Hsped.02g25250.1 Hepe02g2525 564026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2525 356 Pfam Response regulator receiver domain 214 341 IPR001789 GO:0000160(InterPro)
Hepe02g2525 356 Gene3D - 213 355 - -
Hepe02g2525 356 SMART REC_2 212 344 IPR001789 GO:0000160(InterPro)
Hepe02g2525 356 MobiDBLite consensus disorder prediction 1 64 - -
Hepe02g2525 356 PANTHER TWO-COMPONENT RESPONSE REGULATOR 209 352 IPR045279 GO:0009736(InterPro)
Hepe02g2525 356 CDD REC_typeA_ARR 214 343 - -
Hepe02g2525 356 SUPERFAMILY CheY-like 211 343 IPR011006 -
Hepe02g2525 356 ProSiteProfiles Response regulatory domain profile. 213 348 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0637 Hepe-Chr1:68251939 Hepe02g2525 Hepe-Chr2:71971938 8.91e-50 dispersed
Hepe01g0986 Hepe-Chr1:74485700 Hepe02g2525 Hepe-Chr2:71971938 9.39e-67 dispersed
Hepe01g2292 Hepe-Chr1:87499798 Hepe02g2525 Hepe-Chr2:71971938 3.17e-48 dispersed
Hepe02g2242 Hepe-Chr2:63796930 Hepe02g2525 Hepe-Chr2:71971938 1.90e-54 dispersed
Hepe02g2525 Hepe-Chr2:71971938 Hepe04g0485 Hepe-Chr4:56344491 8.80e-64 dispersed
Hepe02g2525 Hepe-Chr2:71971938 Hepe05g0710 Hepe-Chr5:12677465 1.35e-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55104 PF00072 Response_reg 4.80E-20 CL0304 Hepe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2525 K14492 - csv:101210839 266.929