Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g2535 | ATGGAAATTAGAGGAGAGAAGAATGGGTTACTGTCTTGTTTGGCTTTGTTTTGGTTATGGGCTTCTGCAACTGAGGCTTCAACAGCCAAAGGTTTAAACCCGGAAGTTCAAGCTTTGATGGGGATCAAAGCTGCTTTGAAGGATCCTCATTCTGTTCTGGCTTGGGATGAAGATGCTGTGGATCCATGCACTTGGAATTTGATCACTTGCTCTCCTGATAAATTTGTCATTGGCATAGGAGCTCCAAGCCAAAACTTCTCTGGTACACTCTCACCAAGTGTTGGAAATTTGACCAACCTCCAATTTTTGCTTCTTCAGGATAACAATATATCAGGAGAAATTCCCAATGAGATTAGCAAGATATCAAAACTTCACACACTTGATCTTTCAAACAACTTGTTCTCTGGTGAAATTCCCAGCTCTTTCTCAATTTTGAAAAGCCTCCAATACCTGAGACTCAACAATAACAGCTTCTCCGGGCCAATCCCGCCATCGCTGGCTAACATGAACCAGCTTGCCTTGCTGGACCTGTCCTATAATAATTTGAGCAGTCCTGTGCCCAGATTGCTGGCTAAGACATTTAACTTTACTGGAAACTCTTTGATTTGTGCCCCTGGAACTAAGGAAGTATGCTATGGAACAACTCCATTGCCACTTTCTTTTGCTGTTACTAATTCCACATACTCACAACCTCCTAGGAGACATAAAGGCCAGAGAATTGCCTTAGTCATTGGTCTTAGCTTGGGCTGCATCTGTCTGTTAACTCTTGCATATGGTTTCTTTTTCTGGCGAAAGCATAGGCACAACCAGCAAATATTCTTTGAAGCTAATGATCGTCACCGGGACGAACTTAGCCTAGGGAACATAAAGAGGTTTCAGTTCAGAGAACTTCAGAATGCCACTCACAAATTCAGCAGTAAAAATTTGATTGGAAAAGGTGGTTTTGGACATGTATACAGAGGATTTCTACAAGATGGCACCATTGTAGCTGTCAAGAGACTCAAAGATGGGAATGCTATGAGAGGAGAGATCCAGTTTCAGACTGAAGTGGAGATGATAAGCTTGGCAGTGCATAGGAACCTCCTCAAGTTGTATGGTTTCTGTATGACAGAAACCGAGAGGCTTTTGGTCTATCCATATATGTCGAATGGCAGCGTCGCTACCCGTCTTAAAGCAAAACCAGCTCTGGATTGGGGTACAAGGAAGAGCATTGCCTTGGGAGCTGCTAGGGGCTTGTTATACCTACATGAACAGTGTGATCCAAAAATAATTCACAGGGATGTGAAAGCTGCAAATATACTGCTCGATGATTTCTGCGAGGCCGTGGTCGGTGATTTTGGGCTGGCGAAGCTGTTAGATCACAGAGATTCACATGTCACTACTGCAGTGAGGGGAACTGTTGGCCACATGGCACCAGAGTATCTGTCAACAGGCCAATCCTCAGAGAAAACAGATGTTTTCGGGTTCGGAATTCTACTACTCGAGCTCATATCAGGTCAAAGAGCTCTAGAATTTGGAAAAGCAGCAAACCAAAAGGGTGCAATACTGGACTGGGTAAAGAAGATACACCAAGAAAAGAAGCTAGAAATGCTTGTTGACAAAGACTTGAGAAGTAGTTACGACCCGATTGAACTTGAAGAAATTGTTCGAGTAGCTCTCTTGTGCATCCATTATCTTCCAAGCCACAGGCCTAAGATGTCTGAAGTGGTCAGGATGCTTGAAGGAGATGGGCTTGTAGAGAAATGGGAAGCTTCCCAAAGAGCAGAAGCAAGCAGGGGCAGAGCCAATGAGTTCTCCTCTTCAGAACGTTACTCCGATCTTACCGATGATTTTTCACTGTTTGCTCAAGCGATAGAGCTCTCGGGACCGAGATAA | 1875 | 44.0 | MEIRGEKNGLLSCLALFWLWASATEASTAKGLNPEVQALMGIKAALKDPHSVLAWDEDAVDPCTWNLITCSPDKFVIGIGAPSQNFSGTLSPSVGNLTNLQFLLLQDNNISGEIPNEISKISKLHTLDLSNNLFSGEIPSSFSILKSLQYLRLNNNSFSGPIPPSLANMNQLALLDLSYNNLSSPVPRLLAKTFNFTGNSLICAPGTKEVCYGTTPLPLSFAVTNSTYSQPPRRHKGQRIALVIGLSLGCICLLTLAYGFFFWRKHRHNQQIFFEANDRHRDELSLGNIKRFQFRELQNATHKFSSKNLIGKGGFGHVYRGFLQDGTIVAVKRLKDGNAMRGEIQFQTEVEMISLAVHRNLLKLYGFCMTETERLLVYPYMSNGSVATRLKAKPALDWGTRKSIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDFCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHMAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAILDWVKKIHQEKKLEMLVDKDLRSSYDPIELEEIVRVALLCIHYLPSHRPKMSEVVRMLEGDGLVEKWEASQRAEASRGRANEFSSSERYSDLTDDFSLFAQAIELSGPR | 624 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 72261259 | 72265659 | + | Hsped.02g25350.1 | Hepe02g2535 | 564036 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g2535 | 624 | Gene3D | Phosphorylase Kinase; domain 1 | 273 | 380 | - | - | |
Hepe02g2535 | 624 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 381 | 593 | - | - | |
Hepe02g2535 | 624 | SMART | serkin_6 | 304 | 573 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe02g2535 | 624 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 32 | 213 | - | - | |
Hepe02g2535 | 624 | SUPERFAMILY | Protein kinase-like (PK-like) | 283 | 574 | IPR011009 | - | |
Hepe02g2535 | 624 | Pfam | Leucine rich repeat N-terminal domain | 32 | 71 | IPR013210 | - | |
Hepe02g2535 | 624 | ProSitePatterns | Protein kinases ATP-binding region signature. | 310 | 332 | IPR017441 | GO:0005524(InterPro) | |
Hepe02g2535 | 624 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 13 | 624 | - | - | |
Hepe02g2535 | 624 | FunFam | Somatic embryogenesis receptor kinase 1 | 273 | 380 | - | - | |
Hepe02g2535 | 624 | SUPERFAMILY | L domain-like | 34 | 203 | - | - | |
Hepe02g2535 | 624 | Gene3D | Transferase(Phosphotransferase) domain 1 | 381 | 593 | - | - | |
Hepe02g2535 | 624 | Pfam | Leucine rich repeat | 123 | 182 | IPR001611 | GO:0005515(InterPro) | |
Hepe02g2535 | 624 | ProSiteProfiles | Protein kinase domain profile. | 304 | 579 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe02g2535 | 624 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 423 | 435 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe02g2535 | 624 | Gene3D | Ribonuclease Inhibitor | 32 | 213 | IPR032675 | - | |
Hepe02g2535 | 624 | Pfam | Leucine Rich Repeat | 99 | 120 | IPR001611 | GO:0005515(InterPro) | |
Hepe02g2535 | 624 | Pfam | Protein tyrosine and serine/threonine kinase | 307 | 573 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g2535 | Hepe-Chr2:72261259 | Hepe02g3235 | Hepe-Chr2:81933331 | 4.44e-266 | dispersed | |
Hepe02g2535 | Hepe-Chr2:72261259 | Hepe07g0984 | Hepe-Chr7:13399979 | 6.49e-67 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72591 | PF00069 | Pkinase | 6.80E-45 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g2535 | - | - | - | 0.0 |