Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2582 ATGGCGGGTGTAGAATTTCTGGATTTGTTTCCACACCGAGAGCTGGAAGATGGAGCCACTGGTTCGTCTGTTTCGAATCCAACTGATGCTGTGCTCTTTGTAGGATTGAGTTTGGTGCTTGGAATTGCTTGCAGACACCTATTGCGAGGCACCAGAGTTCCTTATACAGTTGCCTTGCTTGTTCTTGGCATCATTCTTGGATCCATTGAATATGGCACACATCATCGATTGGGAAAGATAGGGGATGGCATTCGTCTCTGGGCAAAAATTGATCCTGATCTATTATTAGCTGTTTTCCTTCCTGCTCTGCTGTTCGAGAGTTCATTTTCAATGGAAGTGCACCAAATAAAGAGGTGTCTGGCCCAAATGATCTTATTAGCTGGTCCAGGTGTTTTAATTTCAACCTTCTTGCTTGGATCTGCTTTCAAGTTCACTTTCCCATATAATTGGAATTGGAAAACATCATTGTTGCTTGGGGGACTTCTGAGTGCCACAGATCCTGTGGCTGTTGTAGCTCTATTGAAAGAGCTAGGAGCAAGTAAAAAACTGAATACGATAATAGAAGGAGAATCCTTGATGAATGATGGAACAGCAATTGTGGTTTATCAACTTTTTTATCAAATGGTCCTTGGAAAGAGCTTTGACTGGGGAGCTATAATCAAATATCTCACACAAGTCTCGCTGGGGGCTTTGGGAATTGGTCTTGCTTTTGGGATTGCATCTGTTTTATGGCTCGGGTTCATTTTCAACGACACGGTGATAGAGATTGCATTAACACTTGCTGTGAGCTATACTGCTTACTTCACTGCTCAAGAGGGAGCTGATGTTTCAGGTGTTTTGGCGGTGATGACTTTAGGAATGTTTTATGCTGCAGTTGCAAGAACAGCTTTTAAGGGCGATGGTCAACAAAGCTTACATCATTTTTGGGAAATGGTTGCTTACATAGCGAATACATTAATTTTCATATTGAGTGGAGTTGTTATAGCTGAAGGAGTTCTTGGAAGCAAAGGAGTTCTTGATAATGGAGCTTCATGGGGCTTCCTCATACTGCTTTATGTGTATGTGCAAGCTTCTCGAGTTATGGTTGTTGGAGTACTGTATCCATTTCTGCGGTATTTTGGATATGGCTTGGATTGGAAAGAAGCTACAATACTGGTGTGGTCAGGTCTGCGTGGAGCTGTTGCCCTGTCACTTTCACTGTCAGTTAAGCGATCAAGTGACCACTCATTGTACATCAGTTCAGAAACTGGAACTCTGTTTGTTTTTTTCACGGGTGGAATTGTGTTCTTGACACTTATTGTAAATGGTTCGACCACACAATTCATTTTACATCTTCTGCATATGGACAAGCTCTCTGTGGCTAAGAAACGCATATTGGATTATACAAAATATGAGATGTTGAAGAAAGCATTGGACGCCTTTGGAGATCTTGGAGATGATGAGGAACTGGGACCTGCTGACTGGCCTACAGTGAAAAGATATATCACGAGCCTCAGTCATGTGGAGGGGGAACCACTGCACCCGCACCATGCATTTGAAAGTGATCAACATGTTCACTCTATGAATTTGTTAGACATTCGTATGCGACTTTTGAATGGTGTTCAAGCTGCTTACTGGGGGATGCTTGATGAGGGAAGGATAACACAAACTACTGCAAATATCTTGATGCAATCTGTGGATGAAGCCCTTGATCTGATTGCAAATGAGCCCTTATGTGATTGGAAAGGTTTAAAAGCTAATGTCCATTTTCCAAATTATTACAAGTTCCTTCAGACAAGCATTTTCCCTCAGAAGTTGGTTACATATTTCACTGTGGAAAGATTGGAATCAGGATGTTGTATTTGTGCTGCATTTCTCCGCGCACATAGAATTGCAAGACGACAGCTTCATGAGTTTATAGGTGATAGTGATATTGCTTCTACTGTTATTTATGAAAGTGAGGCTGAAGGTGAAGAAGCACGGAAATTTCTGGAAGAAGTTCGTGAGACATTTCCTCAGGTTTTGCGTGTTGTTAAAACCAGACAAGTAACATATTCAGTGCTCAACCATTTAATTGAATATGTCCAAAATCTAGAGAAGGTTGGCCTATTAGAAGAGAAAGAGATGTTGCATCTTCATGATGCTGTCCAGACTGACTTGAAAAGGCTTCTAAGAAATCCTCCTCTGGTAAAGGTTCCAAATATGCGCAACTTAATTAGTGTCCATCCATTTCTTGGGGCACTTCCTCCTTTAGTCCGCGAACCACTTGAAGTTTCAACCAAAGAAGTGATAAAACTACGCGGTGTGACACTTTACAAGGAAGGTTCAAAGCCTAGTGGTGTTTGGCTTATATCCAATGGAGTCGTAAAGTGGGAAAGTAAGAGCATGAGAAACAAGTTCTCCTTGCACCCCACATTTACTCATGGAAGTACTTTGGGCCTGTATGAATTGCTTACTGGGAAGCCATGCATCTGTAACATGATTACAGATTCTGTTGTTCTGTCTTTTTTTATTGAACATGACAAGTTTCTTTCGGTACTTAGATCAGATCCTTCGGTTGAAGACTTCTTGTGGCAGGAAAGTTCCATTGTTCTTGCCAAACTCTTGCTTCCACAAGTATTTGAGGAAATGGAAATGAGAGACCTGAGAGTTCTTGTTGTTGAAAGGTCAGTAATGACTACGCATATAGCGGGAGAAACAATAGAAATTCCACGCCATTCTATTGGCTTTTTATTAGAAGGATTTATCAAAAGTCGTGGCATCCAAGAGGATCTGATAACATCACCTGCTGTGTTGTTCTCTTCGCACGGGAATCAGAGCTTCCATTATATGGAAAACTCAGGGATGAGTGGGGGTTCCAGTTTTTCTCATCAAGGCTCCTGTTATGAAGTTGAAACAAGATCAAGAGTAATCATTTTTGACATGGCTGCCCTTCAATCAGATGACATTCTAAATCGGTCATCGTCATTTATACATCCTGTCGATCACCCTCAAAGATCTCTGAGCAGAGATCACTCTGGTCTTATGAGTTGGCCTGAACTGTTTCCCAAGCCAAGACCACCACAGAAGCAGAAATCTGAAAGAACTGAGCATCCAACTGATAGCTTGTCTGCAAAGGCAATGCAGCTAAGCATATACGGTAGCATGGTCGATATTCGTCAGCAGACTAAGAGTTTTCCAGGCAATGTTGCCGAACCATCTCTTAGCCGATCAAATCCTGCAATTGCTTCGTATAGAGGTGTTCCCTTTCCATCTGTCAAATCAGAAGGAGCTGCTACAATGAAAAAGAGGCTTGATGTAAGAAAGTTACCAATAAGCACTGTTCGACCCCCACAAGAAAAACCAGTTCTTAATGAGAGAAATGCGAGGGATGATTCAAGCGAGGAATCAGGTGCTGAGGATGATGTCATAGTGAGAATTGATTCACCAAGTGTGCTTTCATTTCACCAGGCTCCTTGA 3438 41.88 MAGVEFLDLFPHRELEDGATGSSVSNPTDAVLFVGLSLVLGIACRHLLRGTRVPYTVALLVLGIILGSIEYGTHHRLGKIGDGIRLWAKIDPDLLLAVFLPALLFESSFSMEVHQIKRCLAQMILLAGPGVLISTFLLGSAFKFTFPYNWNWKTSLLLGGLLSATDPVAVVALLKELGASKKLNTIIEGESLMNDGTAIVVYQLFYQMVLGKSFDWGAIIKYLTQVSLGALGIGLAFGIASVLWLGFIFNDTVIEIALTLAVSYTAYFTAQEGADVSGVLAVMTLGMFYAAVARTAFKGDGQQSLHHFWEMVAYIANTLIFILSGVVIAEGVLGSKGVLDNGASWGFLILLYVYVQASRVMVVGVLYPFLRYFGYGLDWKEATILVWSGLRGAVALSLSLSVKRSSDHSLYISSETGTLFVFFTGGIVFLTLIVNGSTTQFILHLLHMDKLSVAKKRILDYTKYEMLKKALDAFGDLGDDEELGPADWPTVKRYITSLSHVEGEPLHPHHAFESDQHVHSMNLLDIRMRLLNGVQAAYWGMLDEGRITQTTANILMQSVDEALDLIANEPLCDWKGLKANVHFPNYYKFLQTSIFPQKLVTYFTVERLESGCCICAAFLRAHRIARRQLHEFIGDSDIASTVIYESEAEGEEARKFLEEVRETFPQVLRVVKTRQVTYSVLNHLIEYVQNLEKVGLLEEKEMLHLHDAVQTDLKRLLRNPPLVKVPNMRNLISVHPFLGALPPLVREPLEVSTKEVIKLRGVTLYKEGSKPSGVWLISNGVVKWESKSMRNKFSLHPTFTHGSTLGLYELLTGKPCICNMITDSVVLSFFIEHDKFLSVLRSDPSVEDFLWQESSIVLAKLLLPQVFEEMEMRDLRVLVVERSVMTTHIAGETIEIPRHSIGFLLEGFIKSRGIQEDLITSPAVLFSSHGNQSFHYMENSGMSGGSSFSHQGSCYEVETRSRVIIFDMAALQSDDILNRSSSFIHPVDHPQRSLSRDHSGLMSWPELFPKPRPPQKQKSERTEHPTDSLSAKAMQLSIYGSMVDIRQQTKSFPGNVAEPSLSRSNPAIASYRGVPFPSVKSEGAATMKKRLDVRKLPISTVRPPQEKPVLNERNARDDSSEESGAEDDVIVRIDSPSVLSFHQAP 1145
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 72829879 72866319 - Hsped.02g25820.1 Hepe02g2582 564083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2582 1145 Pfam Cyclic nucleotide-binding domain 760 843 IPR000595 -
Hepe02g2582 1145 Gene3D Jelly Rolls 704 863 IPR014710 -
Hepe02g2582 1145 ProSiteProfiles cAMP/cGMP binding motif profile. 737 840 IPR000595 -
Hepe02g2582 1145 PANTHER SODIUM/HYDROGEN EXCHANGER 28 769 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0009941(PANTHER)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
Hepe02g2582 1145 MobiDBLite consensus disorder prediction 1013 1027 - -
Hepe02g2582 1145 MobiDBLite consensus disorder prediction 1109 1129 - -
Hepe02g2582 1145 MobiDBLite consensus disorder prediction 1095 1131 - -
Hepe02g2582 1145 MobiDBLite consensus disorder prediction 1052 1079 - -
Hepe02g2582 1145 FunFam Sodium/hydrogen exchanger 7 724 861 - -
Hepe02g2582 1145 Pfam Sodium/hydrogen exchanger family 37 443 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Hepe02g2582 1145 MobiDBLite consensus disorder prediction 988 1030 - -
Hepe02g2582 1145 SUPERFAMILY cAMP-binding domain-like 725 851 IPR018490 -
Hepe02g2582 1145 Gene3D - 151 203 - -
Hepe02g2582 1145 MobiDBLite consensus disorder prediction 1052 1067 - -
Hepe02g2582 1145 CDD CAP_ED 737 846 IPR000595 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2582 K14726 - csv:101209966 2031.14