Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2585 ATGGAAACAAACCTCTCTCAGCTTTCTACTCTTCTTCCTCTTACTTTAGCAGTCATCTTTATCTTATTTGGTTTGGCTTCTTCAGCAGAACAAGAGGGTGTTACTTCATTAAAAACTGATGCTGCAGCTCTTCTTAAGTTCAAGGATTTGATTGACAATGACCCAAATGGAGTTTTGTCCAGTTGGAAGCTTGAAAACAATCCATGTTCTTGGTATGGAGTTTCATGCCAATCTGGAAGAGCAATTGCTCTTGATTTGAGTGGCTGTAATCTTGCAGGGAATGTTTATTTTGATCCTCTGTCTTCTATGGATATGTTGTTGGCTTTGAATTTGTCTACAAATTCTTTCACTATAAACTCAACTACTTTGCTTCAGCTTCCTTACAATTTGCAGCAACTTGAGCTCTCTCTTGCTAAAGTTGTAGGGAGTGTGCCTGAGAATCTTTTCTCCAACTGTCCAAATCTTGTGTTTGTGGATCTTTCATTCAACAATCTCACAGGCTATCTGCCTGCAAATCTTCTGTTGAATGCTAATAAGCTTCATGATCTTGATCTCTCTTACAACAATCTATCAGGCTCAATCTCAGGGTTGAGAATTAATGAGAATTCTTGCAGCTCTTTGTTGCGCGTTGAATTTTCGGGGAATCGAATCGTCGGTTCGATACCGAACGCCATTTCGAACTGCACGAATCTGCAGACGCTTGGTTTGTCATACAATTATCTCAGTGGGGAAATCCCAAGATCTTTAGGCGAACTCAGTAGTTTGCAGAGGGTGGATCTATCTCACAATCAGCTCACTGGTTGGCTCCCTTCTGATTGGAGAAATGCATGCAGTTCACTTCAAGAACTAAAGCTTTGCTACAACAACATTTCTGGTGTAATTCCAGCTTCCTTCTTTGCTTGCTCCTGGCTTCAAATTCTGGATCTTTCAAATAACAACATATCTGGTCCTTTACCAGATTCCATCTTCAAGAATCTTGTCTCTTTACAGAGCTTGCTATTGAGTAATAACATTATTTCTGGATCATTGCCTTCATCTATATCTCACTGCAAGAAACTTCAGCTTGTAGACTTGAGTTCCAATAGAATTTCTGGTTTGATCTCACCAGATATATGCCCAGGTGCTGAGTCACTTGAGGAACTGAAAATGCCAGACAATCTCATCATAGGAGGAATCCCACCTGGACTCTCACTGTGTTCACAGCTAAAGAAAATTGATCTCAGTTTGAACTATCTGAATGGCTCCATACCTGCAGAGCTTGGAAGGCTTCAGAATCTTGAACAGCTGATAGCATGGTTCAATAGCTTAGAAGGGAAGATCCCTCCAGAATTGGGGAAATGTAAAAGCTTGAAGGATCTTATACTCAATAACAATCGATTAAGTGGCGAAATCCCGACTGAATTGTTCGGTTGCAGCAATCTTGAATGGATTTCACTCACGAGTAATGAACTCACTGGTGAAGTCCCAAAAGAGTTTGGTCTTTTGTCTAGGCTGGCTGTTCTGCAACTTGGGAACAATAGTTTAAGTGGTCAGATACCAGGGGAGTTGGCAAACTGCAGCACTTTGGTTTGGTTGGATTTGAACAGCAATAAGCTTACAGGGGAAATCCCACCTAGACTTGGCAGGCAGCTTGGAGCCAAATCATTGAATGGGATTCTTTCTGGAAACACTCTAGTCTTCGTTCGAAATGTGGGTAATTCATGCAAAGGAGTTGGTGGTTTGTTAGAGTTTGCTGGAATCAGACCTGAAAGACTACAGCAGGAACCAACATTAAAGACCTGTGATTTCACTCGACTATACTCCGGTCCGGTCCTCAGTCTGTTTACGAAATACCAAACTTTGGAGTACTTGGATCTTTCTTACAATGAGCTTCGTGGGAGAATACCAGAAGAGTTTGGAGATATGGTTGCCTTGCAGGTTCTTGAATTATCGCACAACCAACTTTCGGGCGAGATTCCAGTCTCGTTCGGCCGCCTAAAGAACTTAGGAGTGTTTGATGCATCACATAACAGACTGCAGGGTCACATTCCAGATTCATTCTCAAACTTATCATTCTTAGTGCAAATTGATCTATCTTATAATGAACTAACAGGGAGAATTCCATCACGGGGACAGCTAAGTACACTACCTGCAAGTCAATATGCAAACAATCCAGGACTTTGTGGAGTTCCCTTGCCTGAATGCCAGAGCGAAGACGAGCCGGAGACAAGTCCTAATGTAGATGCTGGAAAAGGAAGAACAAAGCTAGAAGCAGGATCATGGGTTAATAGTATTGTTTTAGGTGTTCTTATTTCCATTGCCTGTGTCTGCATTTTGATTGTATGGGCGATTGCGATGCGTGCAAGGCGAAAAGAAGCAGAGGAAGTGAAGATGCTTAATAGTTTACAAGCAATACATGCCCCTACTACATGGAAAATTGACAAAGAGAAAGAGCCATTGAGTATCAATGTGGCAACTTTCCAAAGACAGCTAAGGAAGCTCAAGTTCTCCCAACTGATTGAAGCTACTAATGGCTTCTCAGCCGAAAGTCTGATCGGGAGTGGCGGGTTCGGCGAAGTGTTTAAAGCAACATTGAGGGATGGATCGAGTGTTGCAATCAAGAAACTGATACGTCTTAGTTGCCAGGGAGACCGCGAATTCATGGCGGAGATGGAAACTCTAGGAAAAATCAAACATGGAAATCTAGTACCTCTTCTTGGTTACTGTAAAATAGGTGAGGAGAGGCTTCTAGTGTATGAGTTCATGGAGTTTGGTAGCCTAGAAGAGATGCTCCATGGAAGAGCAAAGATGCAAGATAGAAGACTTCTAACATGGGATGAAAGGAAAAAGATTGGCAGAGGTGCTGCTAAAGGACTATGTTTCCTACACCACAACTGCATTCCACACATAATACACAGAGACATGAAGTCCAGCAATGTACTCTTGGACCATGACTTAGAAGCAAGAGTTTCCGATTTCGGAATGGCAAGGCTGATCAGTGCTCTCGACACTCATCTGAGTGTGAGCACACTTGCAGGCACTCCTGGTTATGTCCCTCCTGAGTACTACCAAAGCTTCCGGTGCACGGCAAAAGGCGATGTCTATTCGTTCGGTGTCGTCCTCTTAGAACTCTTGACGGGGAAACGACCAACCGATAAGGAGGATTTTGGGGACACCAACTTGGTGGGATGGGTGAAAATGAAAGTGAATGATGGAAAACAAATGGAAGTAATAGATCCAGAGTTGCTTTCAGTAACAAAAGCAAGTGATGAATCAGAAGCAGAAGAAGTTAAAGAAATGGTTAGATATTTGGAGATAACTCTTAGGTGTGTAGAAGAGTTTCCTTCCAAAAGGCCAAACATGTTGCAGGTGGTGTCCATGCTGCGAGAGTTGATGCCTGGATCAACCAATGGAAGCAGCAACAGTGCTTGA 3411 42.66 METNLSQLSTLLPLTLAVIFILFGLASSAEQEGVTSLKTDAAALLKFKDLIDNDPNGVLSSWKLENNPCSWYGVSCQSGRAIALDLSGCNLAGNVYFDPLSSMDMLLALNLSTNSFTINSTTLLQLPYNLQQLELSLAKVVGSVPENLFSNCPNLVFVDLSFNNLTGYLPANLLLNANKLHDLDLSYNNLSGSISGLRINENSCSSLLRVEFSGNRIVGSIPNAISNCTNLQTLGLSYNYLSGEIPRSLGELSSLQRVDLSHNQLTGWLPSDWRNACSSLQELKLCYNNISGVIPASFFACSWLQILDLSNNNISGPLPDSIFKNLVSLQSLLLSNNIISGSLPSSISHCKKLQLVDLSSNRISGLISPDICPGAESLEELKMPDNLIIGGIPPGLSLCSQLKKIDLSLNYLNGSIPAELGRLQNLEQLIAWFNSLEGKIPPELGKCKSLKDLILNNNRLSGEIPTELFGCSNLEWISLTSNELTGEVPKEFGLLSRLAVLQLGNNSLSGQIPGELANCSTLVWLDLNSNKLTGEIPPRLGRQLGAKSLNGILSGNTLVFVRNVGNSCKGVGGLLEFAGIRPERLQQEPTLKTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNELRGRIPEEFGDMVALQVLELSHNQLSGEIPVSFGRLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSYNELTGRIPSRGQLSTLPASQYANNPGLCGVPLPECQSEDEPETSPNVDAGKGRTKLEAGSWVNSIVLGVLISIACVCILIVWAIAMRARRKEAEEVKMLNSLQAIHAPTTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAESLIGSGGFGEVFKATLRDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHGNLVPLLGYCKIGEERLLVYEFMEFGSLEEMLHGRAKMQDRRLLTWDERKKIGRGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHDLEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVLLELLTGKRPTDKEDFGDTNLVGWVKMKVNDGKQMEVIDPELLSVTKASDESEAEEVKEMVRYLEITLRCVEEFPSKRPNMLQVVSMLRELMPGSTNGSSNSA 1136
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 72924301 72927711 + Hsped.02g25850.1 Hepe02g2585 564086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2585 1136 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Hepe02g2585 1136 SUPERFAMILY Protein kinase-like (PK-like) 820 1121 IPR011009 -
Hepe02g2585 1136 SMART serkin_6 839 1125 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2585 1136 CDD STKc_IRAK 845 1124 - -
Hepe02g2585 1136 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 606 728 - -
Hepe02g2585 1136 Pfam Leucine rich repeat 213 265 IPR001611 GO:0005515(InterPro)
Hepe02g2585 1136 Pfam Leucine rich repeat 304 363 IPR001611 GO:0005515(InterPro)
Hepe02g2585 1136 Pfam Leucine rich repeat 607 648 IPR001611 GO:0005515(InterPro)
Hepe02g2585 1136 Pfam Leucine Rich Repeat 522 541 IPR001611 GO:0005515(InterPro)
Hepe02g2585 1136 Pfam Leucine Rich Repeat 449 471 IPR001611 GO:0005515(InterPro)
Hepe02g2585 1136 Pfam Leucine Rich Repeat 498 519 IPR001611 GO:0005515(InterPro)
Hepe02g2585 1136 Pfam Leucine Rich Repeat 661 683 IPR001611 GO:0005515(InterPro)
Hepe02g2585 1136 Pfam Leucine Rich Repeat 279 299 IPR001611 GO:0005515(InterPro)
Hepe02g2585 1136 FunFam serine/threonine-protein kinase BRI1-like 2 39 150 - -
Hepe02g2585 1136 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 276 1122 - -
Hepe02g2585 1136 SUPERFAMILY RNI-like 211 540 - -
Hepe02g2585 1136 ProSiteProfiles Protein kinase domain profile. 839 1125 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2585 1136 Gene3D - 553 609 - -
Hepe02g2585 1136 PRINTS Leucine-rich repeat signature 252 265 - -
Hepe02g2585 1136 PRINTS Leucine-rich repeat signature 180 193 - -
Hepe02g2585 1136 Gene3D Transferase(Phosphotransferase) domain 1 915 1134 - -
Hepe02g2585 1136 Pfam Brassinosteroid receptor island domain 550 608 IPR045381 -
Hepe02g2585 1136 FunFam serine/threonine-protein kinase BRI1-like 2 915 1132 - -
Hepe02g2585 1136 Gene3D Ribonuclease Inhibitor 39 150 IPR032675 -
Hepe02g2585 1136 SMART LRR_typ_2 304 325 IPR003591 -
Hepe02g2585 1136 SMART LRR_typ_2 635 659 IPR003591 -
Hepe02g2585 1136 SMART LRR_typ_2 448 471 IPR003591 -
Hepe02g2585 1136 SMART LRR_typ_2 423 447 IPR003591 -
Hepe02g2585 1136 SMART LRR_typ_2 495 519 IPR003591 -
Hepe02g2585 1136 SMART LRR_typ_2 326 350 IPR003591 -
Hepe02g2585 1136 SMART LRR_typ_2 252 275 IPR003591 -
Hepe02g2585 1136 FunFam serine/threonine-protein kinase BRI1-like 2 800 914 - -
Hepe02g2585 1136 SUPERFAMILY L domain-like 64 273 - -
Hepe02g2585 1136 SUPERFAMILY L domain-like 596 724 - -
Hepe02g2585 1136 Pfam Protein kinase domain 841 1118 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2585 1136 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 369 561 - -
Hepe02g2585 1136 Gene3D Ribonuclease Inhibitor 175 728 IPR032675 -
Hepe02g2585 1136 ProSitePatterns Serine/Threonine protein kinases active-site signature. 963 975 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g2585 1136 Gene3D Phosphorylase Kinase; domain 1 800 914 - -
Hepe02g2585 1136 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 200 275 - -
Hepe02g2585 1136 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 276 367 - -
Hepe02g2585 1136 ProSitePatterns Protein kinases ATP-binding region signature. 845 868 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2585 Hepe-Chr2:72924301 Hepe04g1153 Hepe-Chr4:66685738 4.43e-158 dispersed
Hepe01g0640 Hepe-Chr1:68305799 Hepe02g2585 Hepe-Chr2:72924301 3.18e-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72592 PF00069 Pkinase 7.60E-43 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2585 - - - 0.0