Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2597 ATGGACACTATGGAGAGGGCAAGTTTCAGGCACACTGCCTCTGCAATAACTGTCCTTGCACATATTTTTGGTCTCACTGCCTGCATTCTTATGCTTGTTTGGTTGCTGCATTATCGCGGCGGCCTCGCCTACGATTCCCCCAATCCCGACCTCATTTTCAATTGTCACCCGTTCTTCATGCTCCTCGGTTTCGTGTTCATGTCGGGAGAAGCAATGATGGCCTACAAGACAGTGAGAGGAGACAAAATGACAAGGAAGATAGTTCACATGGCGCTGCATTTGGTAGCCATTTGCATGGGAATTGCAGGGATAAATGCTACCTTCAAATTTCATGATCGGGTCAATTTAGAGGATATGTTTAGTTTGCATTCATGGATTGGCATTCTCACTTTCTGCCTTTATGGCTTACAGTGGGTGTTGGGACTGTGTACATTCTTGTTTCCAGGAGTAGATGCTGAGACAAAAGCCAGGCTGCTGCCATGGCACATAAGTGGAGGAAGGGCTCTGCTGATGATGATAATATGCACAGCCTTGACTGGTTTGTCTGAGAAGGCTACTTCTTTGAGACTTACTGCCAACCACGAGTCCCGCTTGCTCAACTTTACCGCTTTCTTCATCCTCCTTTTCGGCATTTCCATCGACGTCTCCATCGGTTTTACTCGGTTTATGCACGTCGATCCCACCGTTTAG 690 47.25 MDTMERASFRHTASAITVLAHIFGLTACILMLVWLLHYRGGLAYDSPNPDLIFNCHPFFMLLGFVFMSGEAMMAYKTVRGDKMTRKIVHMALHLVAICMGIAGINATFKFHDRVNLEDMFSLHSWIGILTFCLYGLQWVLGLCTFLFPGVDAETKARLLPWHISGGRALLMMIICTALTGLSEKATSLRLTANHESRLLNFTAFFILLFGISIDVSIGFTRFMHVDPTV 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 73145893 73149665 + Hsped.02g25970.1 Hepe02g2597 564098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2597 229 ProSiteProfiles Cytochrome b561 domain profile. 19 218 IPR006593 -
Hepe02g2597 229 SMART 561_7 55 181 IPR006593 -
Hepe02g2597 229 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Hepe02g2597 229 PANTHER CYTOCHROME B561-RELATED 13 217 IPR043205 GO:0016491(InterPro)|GO:0016491(PANTHER)
Hepe02g2597 229 FunFam Cytochrome b reductase 1 10 224 - -
Hepe02g2597 229 Gene3D - 9 219 - -
Hepe02g2597 229 CDD Cyt_b561_ACYB-1_like 46 188 - -
Hepe02g2597 229 Pfam Eukaryotic cytochrome b561 56 186 IPR006593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0451 Hepe-Chr1:59386661 Hepe02g2597 Hepe-Chr2:73145893 1.65e-57 dispersed
Hepe02g2597 Hepe-Chr2:73145893 Hepe06g1255 Hepe-Chr6:62378609 5.92e-58 dispersed
Hepe02g2597 Hepe-Chr2:73145893 Hepe02g3250 Hepe-Chr2:82067797 1.63e-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2597 K08360 - csv:101208884 416.001