Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g2619 | ATGTCTTTGCCATCCTTTTCTCCATCCATGGCGCCGTCCGCCCAACAGACCCCTCTCTTACGCTCCCGTCCGCCCTCCAACTCTGATGGCTCCAATTCCCCCATCGGCCCCCTCGCCGTTCTCTTGGGCCGCGCCACTGGCCGCCGTGGAACTTCTATGGTGGTTCGGGAGACGGCGGCGCGTGAACTTGAGGAGCGCCGCATCGATTGGGGCTACTCCAAGCCGATCGTGGCGCTTAACGTTGCGTGGAATTTGGCTTTCGTTTTCGTTTCGCTGGGTGTGCTTGTTCACTCGGTCGATGAAAAACCCAATACGCCAATTCGGCTTTGGATTGTAGTTTATGCCGTTCAGTGCGTGGTGCACGCTGTGCTTGTGTGGTTTGAGTTCAGAAGGAGGAACGAGAGGAGGGTTAGGGATATGGAGACGCAGCAACACCCGCAGCTTGACGAATATGTTGCTAATGAAAGCGATGAAGAAGATGATACCCCGAGGAATGTATCCGGTGTTGCCAAAAGATGTGAGTCAGTGAACACCCTGGTATCGTTAATTTGGTGGTTGTTTGGCTTTTACTGGGTCGTGGCTGGTGGTACCTTCCTCCTGCGGAATGCTTCATCTTTATACTGGCTGGCTGTCGTATTTCTGGCATTTGATGTGTTCTTTGCCATCTTTTGTGTTGTTTTGGCATGTTTGATTGGAATTGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTATATGCTGTTGCAGGCCAGGAAGGTGCAACGGATGCTGATTTAAGTATGCTTCCTAAGTATAGATATCAGGTGTCCAATGATCCTTCTCCGGGGGACGGGTTGATGGTTCCAGTAGAAACAAGCAGCAGATACTTGACGACTGAACGTGTTCTATTACGCGAGGATGCGGAGTGCTGTATATGTCTTTGTCCATACGAGGACGGAGCCGAGCTTCATGCTCTTCCCTGCAATCACCATTTTCATTACGCGTGTATCACAAAATGGCTGAAGATGAATGCAACATGTCCTCTGTGCAAGTACAACATTCTAAAATATTGTGAACCCGTGTAA | 1068 | 50.19 | MSLPSFSPSMAPSAQQTPLLRSRPPSNSDGSNSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWGYSKPIVALNVAWNLAFVFVSLGVLVHSVDEKPNTPIRLWIVVYAVQCVVHAVLVWFEFRRRNERRVRDMETQQHPQLDEYVANESDEEDDTPRNVSGVAKRCESVNTLVSLIWWLFGFYWVVAGGTFLLRNASSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATDADLSMLPKYRYQVSNDPSPGDGLMVPVETSSRYLTTERVLLREDAECCICLCPYEDGAELHALPCNHHFHYACITKWLKMNATCPLCKYNILKYCEPV | 355 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 73523339 | 73526934 | + | Hsped.02g26190.1 | Hepe02g2619 | 564120 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g2619 | 355 | PANTHER | TARGET OF ERK KINASE MPK-1 | 42 | 348 | - | GO:0000325(PANTHER)|GO:0006511(PANTHER)|GO:0016567(PANTHER)|GO:0061630(PANTHER) | |
Hepe02g2619 | 355 | ProSiteProfiles | Zinc finger RING-type profile. | 304 | 345 | IPR001841 | - | |
Hepe02g2619 | 355 | SMART | ring_2 | 304 | 344 | IPR001841 | - | |
Hepe02g2619 | 355 | SUPERFAMILY | RING/U-box | 290 | 351 | - | - | |
Hepe02g2619 | 355 | FunFam | E3 ubiquitin protein ligase RIE1 | 284 | 352 | - | - | |
Hepe02g2619 | 355 | Pfam | Ring finger domain | 303 | 345 | IPR001841 | - | |
Hepe02g2619 | 355 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Hepe02g2619 | 355 | CDD | RING-H2_PA-TM-RING | 303 | 345 | - | - | |
Hepe02g2619 | 355 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 250 | 350 | IPR013083 | - | |
Hepe02g2619 | 355 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g2619 | Hepe-Chr2:73523339 | Hepe06g1213 | Hepe-Chr6:61688937 | 4.11e-104 | dispersed | |
Hepe02g2619 | Hepe-Chr2:73523339 | Hepe05g0628 | Hepe-Chr5:9836517 | 6.64e-81 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g2619 | - | - | - | 0.0 |