Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2619 ATGTCTTTGCCATCCTTTTCTCCATCCATGGCGCCGTCCGCCCAACAGACCCCTCTCTTACGCTCCCGTCCGCCCTCCAACTCTGATGGCTCCAATTCCCCCATCGGCCCCCTCGCCGTTCTCTTGGGCCGCGCCACTGGCCGCCGTGGAACTTCTATGGTGGTTCGGGAGACGGCGGCGCGTGAACTTGAGGAGCGCCGCATCGATTGGGGCTACTCCAAGCCGATCGTGGCGCTTAACGTTGCGTGGAATTTGGCTTTCGTTTTCGTTTCGCTGGGTGTGCTTGTTCACTCGGTCGATGAAAAACCCAATACGCCAATTCGGCTTTGGATTGTAGTTTATGCCGTTCAGTGCGTGGTGCACGCTGTGCTTGTGTGGTTTGAGTTCAGAAGGAGGAACGAGAGGAGGGTTAGGGATATGGAGACGCAGCAACACCCGCAGCTTGACGAATATGTTGCTAATGAAAGCGATGAAGAAGATGATACCCCGAGGAATGTATCCGGTGTTGCCAAAAGATGTGAGTCAGTGAACACCCTGGTATCGTTAATTTGGTGGTTGTTTGGCTTTTACTGGGTCGTGGCTGGTGGTACCTTCCTCCTGCGGAATGCTTCATCTTTATACTGGCTGGCTGTCGTATTTCTGGCATTTGATGTGTTCTTTGCCATCTTTTGTGTTGTTTTGGCATGTTTGATTGGAATTGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTATATGCTGTTGCAGGCCAGGAAGGTGCAACGGATGCTGATTTAAGTATGCTTCCTAAGTATAGATATCAGGTGTCCAATGATCCTTCTCCGGGGGACGGGTTGATGGTTCCAGTAGAAACAAGCAGCAGATACTTGACGACTGAACGTGTTCTATTACGCGAGGATGCGGAGTGCTGTATATGTCTTTGTCCATACGAGGACGGAGCCGAGCTTCATGCTCTTCCCTGCAATCACCATTTTCATTACGCGTGTATCACAAAATGGCTGAAGATGAATGCAACATGTCCTCTGTGCAAGTACAACATTCTAAAATATTGTGAACCCGTGTAA 1068 50.19 MSLPSFSPSMAPSAQQTPLLRSRPPSNSDGSNSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWGYSKPIVALNVAWNLAFVFVSLGVLVHSVDEKPNTPIRLWIVVYAVQCVVHAVLVWFEFRRRNERRVRDMETQQHPQLDEYVANESDEEDDTPRNVSGVAKRCESVNTLVSLIWWLFGFYWVVAGGTFLLRNASSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATDADLSMLPKYRYQVSNDPSPGDGLMVPVETSSRYLTTERVLLREDAECCICLCPYEDGAELHALPCNHHFHYACITKWLKMNATCPLCKYNILKYCEPV 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 73523339 73526934 + Hsped.02g26190.1 Hepe02g2619 564120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2619 355 PANTHER TARGET OF ERK KINASE MPK-1 42 348 - GO:0000325(PANTHER)|GO:0006511(PANTHER)|GO:0016567(PANTHER)|GO:0061630(PANTHER)
Hepe02g2619 355 ProSiteProfiles Zinc finger RING-type profile. 304 345 IPR001841 -
Hepe02g2619 355 SMART ring_2 304 344 IPR001841 -
Hepe02g2619 355 SUPERFAMILY RING/U-box 290 351 - -
Hepe02g2619 355 FunFam E3 ubiquitin protein ligase RIE1 284 352 - -
Hepe02g2619 355 Pfam Ring finger domain 303 345 IPR001841 -
Hepe02g2619 355 MobiDBLite consensus disorder prediction 1 34 - -
Hepe02g2619 355 CDD RING-H2_PA-TM-RING 303 345 - -
Hepe02g2619 355 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 350 IPR013083 -
Hepe02g2619 355 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2619 Hepe-Chr2:73523339 Hepe06g1213 Hepe-Chr6:61688937 4.11e-104 dispersed
Hepe02g2619 Hepe-Chr2:73523339 Hepe05g0628 Hepe-Chr5:9836517 6.64e-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2619 - - - 0.0