Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2634 ATGTCTTGCTCCCAAACTCCCTATCCAGACCTCTGCTTCAACTTCATCAACCAAAACGACGACGATGTATCGACCGCCGATATTATTGATGGAACTTCTCACATCACTCGCTTTCGAAACTCCGCCATTCGAGCCACTTTGAACCAAGCTATAGCGGCCCACAACCACCTTCTCTCCGCCATGGATCTAGATTCCTTTGACGACAACGATGATGATAGAGCAAAATTAGCTTTGATCGACTGTTTGGAACTCTACGAGGATTCGGTTGCCGAACTCAACCGTTCGGCGATCAGCTCCATGAGTGCCAACCCGATTGATCACTTGACACGGCTAAGCGCTTCACTGGCGAACCATCAAACATGTCGGGATGGATTTCGAGATTTCGGATTTTCTTCTCATCATGATTTGAATTCCTTTTTTTCATTTCAAATTTTGAGTAACTTCTCAAAATTGGTCAGCAACTCTCTCGCCATCGATAAGGTTGCGGCTGCCGCTGCCACCTCTACTTCCTCCACCACTGGTGGTCGACGACTGCTTGCCGGCTCGTTTCCTGAGTGGGTTTCCGGTGATGATCGGATGCTCCTCCAGGACACGGCCGGAAAGGCGGTGGATATGGTGGTGGCCCAAGATGGGAGTGGTGATTTTAGGACGATATCAGAGGCGGTGGTGGCGGCGGCGAAAAGGAAAAGAAGCGGAAGGTTTGTTATATATGTAAAAGGTGGGGTTTACAGAGAGAATGTTTTGATTCATAAGACAATGAAGAATGTTATGATGATCGGAGATGGGATTGATTCGACGATCGTCACCGCCATGAAGAACGTCCAAGATGGATCAACCACTTTCCGATCAGCCACTTTTGCGGTGGCCGGCGAGGGGTTCATTGCCAAAGACATGACGTTTGAGAACACGGCGGGGCCGGAGAAACACCAAGCCGTAGCACTCCGATCTAATTCCGATCGCTCAGTTTTCTATCGATGCAGCTTCAAAGGCTACCAAGACACTCTATACGCTCACTCCAATCGCCAATTCTACCGTGAATGCCACATTTACGGAACCGTCGACTTCATATTTGGCGACGGCGCCGCCGTATTTCAAAATTGTAACATCTTCGTTAGAAAGCCAATGAAGAATCAGAAAAACACTATCACGGCGCAGGCGAGATCTGACCCGAATGAGAATACCGGGTTTGTGATACACAATTCCATCATCGGAGCGTCGTTGGACCTGAAGCCGGTGGAGGCTCTGTATGAAACTTATTTGGGGAGGCCGTGGAAGGCGTATTCAAGGACGGTGATAATGAGGAGTTTTTTGGATGGGCTGATTGAACCGGCTGGGTGGCTTCCGTGGGCTGGAGATTTCGGTTTGAGCACGGTTTATTATGGGGAGTTTATGAACACCGGCGGTGGGGCGAGTACGACGGGGAGGGTGCGGTGGCCGGGATATCATGTGATAACGAGTGCGGCGGAGGCGGAAAGGTTTACGGTGAAAAGTTTGTTGGAAGGAGGAGGTTGGATTCCAACTACTGGAGTGCCGTTTGCAAATGGGTTATAA 1551 49.77 MSCSQTPYPDLCFNFINQNDDDVSTADIIDGTSHITRFRNSAIRATLNQAIAAHNHLLSAMDLDSFDDNDDDRAKLALIDCLELYEDSVAELNRSAISSMSANPIDHLTRLSASLANHQTCRDGFRDFGFSSHHDLNSFFSFQILSNFSKLVSNSLAIDKVAAAAATSTSSTTGGRRLLAGSFPEWVSGDDRMLLQDTAGKAVDMVVAQDGSGDFRTISEAVVAAAKRKRSGRFVIYVKGGVYRENVLIHKTMKNVMMIGDGIDSTIVTAMKNVQDGSTTFRSATFAVAGEGFIAKDMTFENTAGPEKHQAVALRSNSDRSVFYRCSFKGYQDTLYAHSNRQFYRECHIYGTVDFIFGDGAAVFQNCNIFVRKPMKNQKNTITAQARSDPNENTGFVIHNSIIGASLDLKPVEALYETYLGRPWKAYSRTVIMRSFLDGLIEPAGWLPWAGDFGLSTVYYGEFMNTGGGASTTGRVRWPGYHVITSAAEAERFTVKSLLEGGGWIPTTGVPFANGL 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 73797441 73799388 + Hsped.02g26340.1 Hepe02g2634 564135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2634 516 CDD PMEI-like_3 2 158 - -
Hepe02g2634 516 Pfam Plant invertase/pectin methylesterase inhibitor 2 158 IPR006501 GO:0004857(InterPro)
Hepe02g2634 516 FunFam Pectinesterase 198 516 - -
Hepe02g2634 516 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 160 IPR035513 -
Hepe02g2634 516 Pfam Pectinesterase 204 501 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Hepe02g2634 516 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 161 IPR035513 -
Hepe02g2634 516 SUPERFAMILY Pectin lyase-like 201 514 IPR011050 -
Hepe02g2634 516 Gene3D - 200 516 IPR012334 -
Hepe02g2634 516 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
Hepe02g2634 516 PANTHER PECTINESTERASE 2 507 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Hepe02g2634 516 NCBIfam pectinesterase inhibitor domain 2 158 IPR006501 GO:0004857(InterPro)
Hepe02g2634 516 SMART PMEI_2 1 158 IPR006501 GO:0004857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2634 Hepe-Chr2:73797441 Hepe06g1367 Hepe-Chr6:63939918 1.06e-170 dispersed
Hepe01g1123 Hepe-Chr1:76124735 Hepe02g2634 Hepe-Chr2:73797441 1.24e-114 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2634 - - - 0.0