Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2647 ATGGAAAATTTCTTGGGTCTTCTCCGAATTCGGGTGCTACGCGGTATTAATCTCGCTGTTCGTGATACTCGTAGCAGCGATCCTTTTGTCGTCGTCACAATGGGCGAGCAGAGTTTGAAGACCCTTGTGATGAAAAATAACTGCAATCCTGAATGGAATGATGATTTGACTCTTTCAATTTCAGATCTTACGACTCCAATCTGTTTATCAGTGTTTGACAAAGACACATTAACAGTACATGACAAAATGGGAGACGCCGTGATCGACATCGAACCATACATAGAGGTTTTAAAGATGGGACTGGAGAGCCTCCCAGATGAGTGTGTGGTTAAGAGAGTATATCCAAGTAAAACAAACTGTTTAGCTGATGAGAGCCAATGTGTTTGGAAGAAGGGGAAAATTGTACAGAACATGTTCCTCAGATTGAGGAATGTAGAGTGTGGTGAGGTGGCAATTCAGCTCGAATGGATCGACATTCCTGGTTCTAAGGGTTTGCCGATCGAGGGTACGAGCTATTTCTGA 522 43.3 MENFLGLLRIRVLRGINLAVRDTRSSDPFVVVTMGEQSLKTLVMKNNCNPEWNDDLTLSISDLTTPICLSVFDKDTLTVHDKMGDAVIDIEPYIEVLKMGLESLPDECVVKRVYPSKTNCLADESQCVWKKGKIVQNMFLRLRNVECGEVAIQLEWIDIPGSKGLPIEGTSYF 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 73966681 73969414 - Hsped.02g26470.1 Hepe02g2647 564148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2647 173 Pfam C2 domain 6 92 IPR000008 -
Hepe02g2647 173 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Hepe02g2647 173 SMART C2_3c 7 102 IPR000008 -
Hepe02g2647 173 CDD C2_ArfGAP 5 148 - -
Hepe02g2647 173 Gene3D C2 domain 5 164 IPR035892 -
Hepe02g2647 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 152 IPR035892 -
Hepe02g2647 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2647 Hepe-Chr2:73966681 Hepe09g0393 Hepe-Chr9:3530798 1.04e-70 dispersed
Hepe01g0547 Hepe-Chr1:64949248 Hepe02g2647 Hepe-Chr2:73966681 1.20e-71 wgd
Hepe02g2647 Hepe-Chr2:73966681 Hepe07g2353 Hepe-Chr7:67880684 9.66e-77 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2647 - - - 0.0