Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g2673 | ATGGCGATTTTACCTATCAACTCATCCAACTTGGATCTCTCCATTTCCATGCCCGGCTTTGCTTCTTCCCCGTCTCGTCCTTCTTTTGCGATAGGACTGGACATGAACCGAGTACCGGTGGCGGGAGAGGCGGAGGAAGAATGGGCGGTGGCGCCGAGCGCGGAGGTGGAGACAGAGGAAGAGAGCTGCATTAATAATGGAGGTCATCCAAGGAAGAAGCTTCGTCTTTCAAAAGATCAGTCTCGTCTTCTTGAAGAAAGCTTCAAGATCAACCATACATTAAACACTAAGCAGAAGGAAACTTTGGCTATGGAGTTGAAGCTGAAGCCAAGGCAAGTTGAAGTATGGTTTCAGAATCGTAGGGCCAGGAACAAGCTGAAGCAAACCGAGATAGAATGTGAATATTTGAAGAGATGGTTTGGATCATTGACAGAGCAAAACCGGCGGCTGCGGCGAGAATTGGAGGAGCTGAGGGCCGTCAAGGTTGCTCCGCCCGCCGTGGTTATTTCACCCCATGGTCGACAGCCGCCACTCCCCGTGTCCACTATAACCATGTGTCCCCGGTGCGAGCGTGTAACCGCCGCCACTGTAACATCTAGTAAGCTGGCTGCAGCGACCAGGACCGCCACCGCCACTACCACCGCAATGCCATCCAAGGCGGTTCTGTCCGCCCTCAAATTGCGGCAGCCATCGCGAGCTTGCTGA | 705 | 53.33 | MAILPINSSNLDLSISMPGFASSPSRPSFAIGLDMNRVPVAGEAEEEWAVAPSAEVETEEESCINNGGHPRKKLRLSKDQSRLLEESFKINHTLNTKQKETLAMELKLKPRQVEVWFQNRRARNKLKQTEIECEYLKRWFGSLTEQNRRLRRELEELRAVKVAPPAVVISPHGRQPPLPVSTITMCPRCERVTAATVTSSKLAAATRTATATTTAMPSKAVLSALKLRQPSRAC | 234 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 74407427 | 74413484 | - | Hsped.02g26730.1 | Hepe02g2673 | 564174 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g2673 | 234 | SMART | halz | 127 | 170 | IPR003106 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g2673 | 234 | Gene3D | - | 64 | 133 | - | - | |
Hepe02g2673 | 234 | SMART | HOX_1 | 69 | 131 | IPR001356 | GO:0003677(InterPro) | |
Hepe02g2673 | 234 | ProSiteProfiles | 'Homeobox' domain profile. | 67 | 127 | IPR001356 | GO:0003677(InterPro) | |
Hepe02g2673 | 234 | SUPERFAMILY | Homeodomain-like | 59 | 128 | IPR009057 | - | |
Hepe02g2673 | 234 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 | 44 | 210 | IPR050762 | - | |
Hepe02g2673 | 234 | FunFam | Homeobox-leucine zipper protein 18 | 54 | 132 | - | - | |
Hepe02g2673 | 234 | Pfam | Homeobox associated leucine zipper | 127 | 159 | IPR003106 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g2673 | 234 | CDD | homeodomain | 70 | 128 | IPR001356 | GO:0003677(InterPro) | |
Hepe02g2673 | 234 | ProSitePatterns | 'Homeobox' domain signature. | 102 | 125 | IPR017970 | GO:0000981(InterPro)|GO:0006355(InterPro) | |
Hepe02g2673 | 234 | Pfam | Homeodomain | 71 | 125 | IPR001356 | GO:0003677(InterPro) | |
Hepe02g2673 | 234 | Coils | Coil | 140 | 160 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g0469 | Hepe-Chr1:61314157 | Hepe02g2673 | Hepe-Chr2:74407427 | 6.90e-76 | dispersed | |
Hepe02g2673 | Hepe-Chr2:74407427 | Hepe07g0591 | Hepe-Chr7:6437643 | 5.83e-41 | dispersed | |
Hepe02g2673 | Hepe-Chr2:74407427 | Hepe04g1352 | Hepe-Chr4:69173731 | 1.76e-41 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55117 | PF00046 | Homeodomain | 1.30E-16 | CL0123 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g2673 | K09338 | - | csv:101206325 | 300.827 |