Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2677 ATGCTTGTGGTGGGTCTGTTTCTCATTCTTCTTTGTTGCTGCTGCTCTGATAATTGTCTTCTTCTTGTGAGTTCTTTGAATGATGAAGGGTTTGTGCTTTTGTCACTCAAGCAGTCCATTTCTGAAGACCCAGATGGGGCTTTGAGCAATTGGGTTTCTTCTGATGAAACCCCTTGTTCTTGGAATGGAATTAGTTGTATAGATCAAATTGTTGTTTCTGTTAGTTTTCCTAAGAGGAATTTGTATGGATTTCTTCCTTCTTCTCTTGGAGCTCTTTCTGGGCTTCGCCATGTGAATTTGAGGAACAATAGGCTTTTTGGGATTTTGCCTTTTCAGCTCTTTTCTGCTCAAGGGCTTCAGAGCTTGGTTCTTTATGGGAATTCCTTTTCTGGGTCTGTTCCAAATGGGATTGGGAAGCTTAAATTCCTTCAAACTTTGGATTTGTCTCAAAATCTCTTTAATGGGTCATTACCCACTTCCATTATTCAATGCAAGAGGCTTAAAACCCTCGATGTTAGTCAGAATAACTTCACTGGTTCACTGCCACTTAGGTTTGGAACTAGTTTGAGTTCTTTGGAGAAACTGGATCTTTCATTTAACAGCTTTGGTGGATCTATTCCTAGTGATTTGGGGAACTTGTCTAGCTTAGAAGGCACTTTTGATTTGTCTCATAATCTTTTTTCTGGTTCAATTCCAGCTAGCCTTGGAAACCTACCTGAAAAGGTTTACATTGATCTTAGTTCTAACCATTTGAGTGGCCCAATACCCCAAAATGGTGCTTTGATGAACAGAGGACCCACTGCTTTTATTGGGAACCCTGGCCTCTGTGGTTCCCCATTGAAGAACACATGTTCTTCAGAAGCTATAAGTGCAAGCTCACCGTCGTTGATTCCGTTTCTCCCGGACGATCGATCACCAGGGATTTCTGGTGACAATGCTGATAAAGCCAGGGGATTAAGTAAGAGTGCTGTGATTGCAATAGTAGTTGGTGATGTGATTGGGATATGTCTAGTTGGGTTATTGTTCTCATATTGTTATTCTAGAGTGTGTAATCGAAGAAGGAGCAAAGACGAGAACGGGTGTACTTCGGATAAGGGGAAAGGAAGGAACGAATGTTTATGCTTCGGGAAGGATGAATCCGATACGGTTTCGCAGAATGTGGAGCAGTATGATCTTGTGGCTTTGGATGCACAAGTTGAATTTGATCTTGATGAACTTCTCAAGGCATCAGCATTCGTTCTTGGCAAAAGTGGGATTGGGATAGTGTACAAAGTTGTGCTTGAAGATGGAGTTACGTTGGCCGTGCGACGATTAGGCGAAGGCGGTTCTCAAAGGTTCAAAGAATTTCAAACAGAAGTAGAAGCAATAGCAAAGCTAAGGCATCCTAATATTGTCACTCTTAGAGCCTATTACTGGTCTGTTGATGAGAAGCTGCTCATTTACGACTTCATACCCAATGGAAACCTTGCCAATGCCATTCATGGAGGAACCCCAACCTTACAATCAAGTCGAGTCGCCTCTGAGAAACCGTTAGATCCAAAGAAACCGAAAATCGTAACATCGGCCGACATCATTTGCAGTTCATCTTCCAATGCAGGAACTTGTTATCAGGCCCCTGAATCACTCAAAGTCTTGAAACCATCCCAAAAATGGGATGTTTACTCATTTGGTGTGATCTTACTTGAACTAATCACTGGAAGATTCCCACTAATCCAAGTGAGTTCATCTTCCTCTGAAATGGATCTTGTCCATTGGATTCAACTCTGCATTGAAGATCAAAAGCCTTTTTCACAAGTCATTGATCCATATCTAGTTCAAGATGCAGATAAAGAAGGAGAGATCATCTCTGTACTCAGAATTGCAATGTCTTGTGTTCATGGGAGCCCGGAAAGGAGACCTTCCATGAGACACATCTCCGACGCCCTCGAAAGGCTATTATCGGCGTCGTCATCATCGACGAAGAAAAGTGATGGAAGTTTGTGTATTGATTAA 1992 42.07 MLVVGLFLILLCCCCSDNCLLLVSSLNDEGFVLLSLKQSISEDPDGALSNWVSSDETPCSWNGISCIDQIVVSVSFPKRNLYGFLPSSLGALSGLRHVNLRNNRLFGILPFQLFSAQGLQSLVLYGNSFSGSVPNGIGKLKFLQTLDLSQNLFNGSLPTSIIQCKRLKTLDVSQNNFTGSLPLRFGTSLSSLEKLDLSFNSFGGSIPSDLGNLSSLEGTFDLSHNLFSGSIPASLGNLPEKVYIDLSSNHLSGPIPQNGALMNRGPTAFIGNPGLCGSPLKNTCSSEAISASSPSLIPFLPDDRSPGISGDNADKARGLSKSAVIAIVVGDVIGICLVGLLFSYCYSRVCNRRRSKDENGCTSDKGKGRNECLCFGKDESDTVSQNVEQYDLVALDAQVEFDLDELLKASAFVLGKSGIGIVYKVVLEDGVTLAVRRLGEGGSQRFKEFQTEVEAIAKLRHPNIVTLRAYYWSVDEKLLIYDFIPNGNLANAIHGGTPTLQSSRVASEKPLDPKKPKIVTSADIICSSSSNAGTCYQAPESLKVLKPSQKWDVYSFGVILLELITGRFPLIQVSSSSSEMDLVHWIQLCIEDQKPFSQVIDPYLVQDADKEGEIISVLRIAMSCVHGSPERRPSMRHISDALERLLSASSSSTKKSDGSLCID 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 74475455 74477864 + Hsped.02g26770.1 Hepe02g2677 564178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2677 663 Pfam Leucine rich repeat 94 152 IPR001611 GO:0005515(InterPro)
Hepe02g2677 663 ProSiteProfiles Protein kinase domain profile. 408 646 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g2677 663 Pfam Protein tyrosine and serine/threonine kinase 414 503 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g2677 663 Pfam Protein tyrosine and serine/threonine kinase 529 641 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g2677 663 Gene3D Ribonuclease Inhibitor 26 185 IPR032675 -
Hepe02g2677 663 SUPERFAMILY L domain-like 27 281 - -
Hepe02g2677 663 Gene3D Transferase(Phosphotransferase) domain 1 508 660 - -
Hepe02g2677 663 Gene3D Ribonuclease Inhibitor 186 286 IPR032675 -
Hepe02g2677 663 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Hepe02g2677 663 SMART LRR_typ_2 92 116 IPR003591 -
Hepe02g2677 663 SMART LRR_typ_2 189 213 IPR003591 -
Hepe02g2677 663 SMART LRR_typ_2 140 164 IPR003591 -
Hepe02g2677 663 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 530 647 IPR046959 -
Hepe02g2677 663 FunFam Leucine-rich repeat receptor-like protein kinase 191 286 - -
Hepe02g2677 663 FunFam Leucine-rich repeat receptor-like protein kinase 391 483 - -
Hepe02g2677 663 Gene3D Phosphorylase Kinase; domain 1 376 483 - -
Hepe02g2677 663 Pfam Leucine Rich Repeat 166 186 IPR001611 GO:0005515(InterPro)
Hepe02g2677 663 Pfam Leucine Rich Repeat 191 213 IPR001611 GO:0005515(InterPro)
Hepe02g2677 663 Pfam Leucine Rich Repeat 220 238 IPR001611 GO:0005515(InterPro)
Hepe02g2677 663 SUPERFAMILY Protein kinase-like (PK-like) 413 646 IPR011009 -
Hepe02g2677 663 FunFam Leucine-rich repeat receptor-like protein kinase 26 183 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2677 Hepe-Chr2:74475455 Hepe02g3423 Hepe-Chr2:83612214 8.06e-104 dispersed
Hepe02g2677 Hepe-Chr2:74475455 Hepe01g1165 Hepe-Chr1:76776293 3.71e-199 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72596 PF07714 PK_Tyr_Ser-Thr 7.60E-08 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2677 - - - 0.0