Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g2690 ATGAGTGGCGGTGGTGCTTCTCCAAGCACCAGCGATTTGATCTGCCACGCCGGTGCCGGTGCTGCTGCAGGTACTATAGCAGCCACGTTTGTCTGCCCTTTAGATGTGATCAAGACGAGGCTGCAAGTGCACGGTCTTCCTTCTAGCCAAAGAGGAGGTAGTATAATTATAACTAGCCTACAAGACATAATGCGTTCTGACGGTTTCAGGGGACTGTACCGTGGCCTTTCACCGACAATAGTAGCACTTCTTCCAAACTGGGCTGTATACTTCACAGTTTATGAGCATCTAAAAGGCCTACTTCATTCAGATGGGGACGATGGTCAACTCTCATTTGGGAAAAATATGGTTGCTGCTGCTGGCGCTGGGGCATCTACTGCCATTGCAACAAATCCTTTGTGGGTTGTTAAGACCAGACTCCAAACACAGGGAATGAGGCCTGGTGTGGTTCCTTACACAGGCATGATTTCAGCATTTACCAGGATCATACGGGAAGAAGGATTCCGTGGGCTTTACAGTGGTATCATCCCTTCATTGGTTGGGATAAGTCATGTTGCGATTCAGTTTCCAGCATATGAAAAGCTCAAATCGTATATGGCAAAAAGAGATAACACAACCGTTGAAACGCTAAGTCCAGGAAGTTTAGCTATTGCCTCCTCATTGGCAAAAATTACGGCCTCAGTAACAACTTACCCACATGAGGTAATTCGTTCCCGGCTGCAAGAGCAAGGCCAAGCCAGAAACGTTGCTCCTCAATACTCAGGAGTTATGGACTGTATCAAAAAGGTTTTCCGAAAGGAAGGTCTCCGCGGTTTTTACCGGGGTTGTGGGACGAATCTGTTGCGAACAACTCCATCAGCTGTAATAACTTTCACCAGCTATGAGATGATACATAGGTTCCTACTGCGAGCTATACCTCCAGGCGAGGAGACATATTCAGAACGGAGTTCAGATAGCGTTGCGAAGCCCCAAAAGGCGAACATAGACAATTCAAAGGAAGGTAGCGATTCCGGCACACAGCAATCACAATCCCATCCAAGTAAGCAAACTAGAATTCCTCTGGGGAACAAAGAACAGTTAACATCTAGACACTGA 1095 47.03 MSGGGASPSTSDLICHAGAGAAAGTIAATFVCPLDVIKTRLQVHGLPSSQRGGSIIITSLQDIMRSDGFRGLYRGLSPTIVALLPNWAVYFTVYEHLKGLLHSDGDDGQLSFGKNMVAAAGAGASTAIATNPLWVVKTRLQTQGMRPGVVPYTGMISAFTRIIREEGFRGLYSGIIPSLVGISHVAIQFPAYEKLKSYMAKRDNTTVETLSPGSLAIASSLAKITASVTTYPHEVIRSRLQEQGQARNVAPQYSGVMDCIKKVFRKEGLRGFYRGCGTNLLRTTPSAVITFTSYEMIHRFLLRAIPPGEETYSERSSDSVAKPQKANIDNSKEGSDSGTQQSQSHPSKQTRIPLGNKEQLTSRH 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 74687938 74692225 + Hsped.02g26900.1 Hepe02g2690 564191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g2690 364 Pfam Mitochondrial carrier protein 109 201 IPR018108 -
Hepe02g2690 364 Pfam Mitochondrial carrier protein 13 103 IPR018108 -
Hepe02g2690 364 Pfam Mitochondrial carrier protein 210 302 IPR018108 -
Hepe02g2690 364 Gene3D Mitochondrial carrier domain 4 104 IPR023395 -
Hepe02g2690 364 Gene3D Mitochondrial carrier domain 105 305 IPR023395 -
Hepe02g2690 364 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 12 301 - -
Hepe02g2690 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 110 198 IPR018108 -
Hepe02g2690 364 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 311 IPR044712 GO:0006862(InterPro)|GO:0022857(PANTHER)|GO:0035352(PANTHER)|GO:0051724(PANTHER)|GO:0055085(InterPro)|GO:0055085(PANTHER)
Hepe02g2690 364 MobiDBLite consensus disorder prediction 311 364 - -
Hepe02g2690 364 SUPERFAMILY Mitochondrial carrier 11 296 IPR023395 -
Hepe02g2690 364 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085(InterPro)
Hepe02g2690 364 PRINTS Mitochondrial carrier protein signature 75 95 IPR002067 GO:0055085(InterPro)
Hepe02g2690 364 PRINTS Mitochondrial carrier protein signature 219 241 IPR002067 GO:0055085(InterPro)
Hepe02g2690 364 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085(InterPro)
Hepe02g2690 364 PRINTS Mitochondrial carrier protein signature 125 143 IPR002067 GO:0055085(InterPro)
Hepe02g2690 364 PRINTS Mitochondrial carrier protein signature 172 190 IPR002067 GO:0055085(InterPro)
Hepe02g2690 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 100 IPR018108 -
Hepe02g2690 364 MobiDBLite consensus disorder prediction 312 364 - -
Hepe02g2690 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 300 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2690 Hepe-Chr2:74687938 Hepe03g1870 Hepe-Chr3:75697492 1.15e-132 dispersed
Hepe02g2690 Hepe-Chr2:74687938 Hepe01g2032 Hepe-Chr1:85030691 8.20e-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g2690 K15115 - csv:101216902 600.127